Orthogroup:group_2840


Homologs in group_2840

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10540 FBDBKF_10540 Morganella morganii S1 fadR DNA-binding transcriptional regulator, FadR family
EHELCC_14875 EHELCC_14875 Morganella morganii S2 fadR DNA-binding transcriptional regulator, FadR family
NLDBIP_14705 NLDBIP_14705 Morganella morganii S4 fadR DNA-binding transcriptional regulator, FadR family
LHKJJB_14640 LHKJJB_14640 Morganella morganii S3 fadR DNA-binding transcriptional regulator, FadR family
HKOGLL_13260 HKOGLL_13260 Morganella morganii S5 fadR DNA-binding transcriptional regulator, FadR family
F4V73_RS14250 F4V73_RS14250 Morganella psychrotolerans - FCD domain-containing protein

Distribution of group_2840 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2840 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2840

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2840.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fadR 5
2 - 1

Product

# Product Occurence
1 DNA-binding transcriptional regulator, FadR family 5
2 FCD domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2186 6 K Transcription (K) DNA-binding transcriptional regulator, FadR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13637 6 GntR family transcriptional regulator, uxu operon transcriptional repressor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00392 6 Bacterial regulatory proteins, gntR family
PF07729 6 FCD domain

Annotations of the 76 SwissProt hits

Annotation Number of occurrences
Exu regulon transcriptional regulator 4
Galactonate operon transcriptional repressor 1
Glc operon transcriptional activator 2
HTH-type transcriptional regulator LutR 1
HTH-type transcriptional regulator Mce2R 2
HTH-type transcriptional repressor GamR 1
HTH-type transcriptional repressor NanR 38
HTH-type transcriptional repressor RspR 1
Nta operon transcriptional regulator 1
Probable rhizopine catabolism regulatory protein MocR 1
Putative L-lactate dehydrogenase operon regulatory protein 2
Pyruvate dehydrogenase complex repressor 6
Uncharacterized HTH-type transcriptional regulator MT0514 1
Uncharacterized HTH-type transcriptional regulator Mb0505 1
Uncharacterized HTH-type transcriptional regulator Mb0601 1
Uncharacterized HTH-type transcriptional regulator Rv0494 1
Uncharacterized HTH-type transcriptional regulator YcbG 1
Uncharacterized HTH-type transcriptional regulator YdeF 1
Uncharacterized HTH-type transcriptional regulator YdfH 3
Uncharacterized HTH-type transcriptional regulator YdhC 1
Uncharacterized HTH-type transcriptional regulator YidP 1
Uncharacterized HTH-type transcriptional regulator YisV 1
Uncharacterized HTH-type transcriptional regulator YmfC 1
Uncharacterized HTH-type transcriptional regulator in unstable DNA locus 1
Uxu operon regulator 1
Uxu operon transcriptional regulator 1

Protein length

Min length 253
Max length 257
Mean length (sd) 255.2 (2.0)
Median length 255.5

Protein length distribution