Orthogroup:group_2839


Homologs in group_2839

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10535 FBDBKF_10535 Morganella morganii S1 metC Cystathionine beta-lyase/cystathionine gamma-synthase
EHELCC_14870 EHELCC_14870 Morganella morganii S2 metC Cystathionine beta-lyase/cystathionine gamma-synthase
NLDBIP_14700 NLDBIP_14700 Morganella morganii S4 metC Cystathionine beta-lyase/cystathionine gamma-synthase
LHKJJB_14645 LHKJJB_14645 Morganella morganii S3 metC Cystathionine beta-lyase/cystathionine gamma-synthase
HKOGLL_13265 HKOGLL_13265 Morganella morganii S5 metC Cystathionine beta-lyase/cystathionine gamma-synthase
F4V73_RS14245 F4V73_RS14245 Morganella psychrotolerans - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme

Distribution of group_2839 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2839 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2839

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2839.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 metC 5
2 - 1

Product

# Product Occurence
1 Cystathionine beta-lyase/cystathionine gamma-synthase 5
2 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0626 6 E Amino acid transport and metabolism (E) Cystathionine beta-lyase/cystathionine gamma-synthase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01053 6 Cys/Met metabolism PLP-dependent enzyme

Annotations of the 88 SwissProt hits

Annotation Number of occurrences
Alanine racemase ungC 1
Alanine racemase ungC' 1
Canavanine gamma-lyase 2
Cystathionine beta-lyase 10
Cystathionine beta-lyase MetC 3
Cystathionine beta-lyase, chloroplastic 2
Cystathionine gamma-lyase 9
Cystathionine gamma-synthase 11
Cystathionine gamma-synthase 1, chloroplastic 1
Cystathionine gamma-synthase-like enzyme iboG1 1
Cystathionine gamma-synthase-like enzyme iboG2 1
Cystathionine gamma-synthase-like protein ankD 1
Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase 1
Histidinol-phosphate aminotransferase 3
Homocysteine synthase 2
Homocysteine/cysteine synthase 3
L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase 1
L-alanine/L-glutamate racemase 2
L-methionine gamma-lyase 7
L-seryl-tRNA(Sec) selenium transferase 1
Methionine gamma-lyase 1
Mimosinase, chloroplastic 2
O-acetyl-L-homoserine sulfhydrylase 3
O-acetyl-L-homoserine sulfhydrylase 1 1
O-acetyl-L-homoserine sulfhydrylase 2 1
O-succinylhomoserine sulfhydrylase 3
Probable cystathionine gamma-synthase 1
Probable cystathionine gamma-synthase (Fragment) 1
Probable cystathionine gamma-synthase 2 1
Putative cystathionine beta-lyase 2
Putative cystathionine gamma-lyase 1
Putative cystathionine gamma-lyase 2 1
Sulfhydrylase FUB7 3
Sulfhydrylase-like protein lolC1 1
Sulfhydrylase-like protein lolC2 1
Uncharacterized trans-sulfuration enzyme C23A1.14c 1
Uncharacterized trans-sulfuration enzyme YHR112C 1

Protein length

Unique protein length 381

Protein length distribution