Orthogroup:group_2802


Homologs in group_2802

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09155 FBDBKF_09155 Morganella morganii S1 hdc histidine decarboxylase
EHELCC_10255 EHELCC_10255 Morganella morganii S2 hdc histidine decarboxylase
NLDBIP_10600 NLDBIP_10600 Morganella morganii S4 hdc histidine decarboxylase
LHKJJB_10755 LHKJJB_10755 Morganella morganii S3 hdc histidine decarboxylase
HKOGLL_13815 HKOGLL_13815 Morganella morganii S5 hdc histidine decarboxylase
F4V73_RS10795 F4V73_RS10795 Morganella psychrotolerans - histidine decarboxylase

Distribution of group_2802 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2802 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2802

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2802.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hdc 5
2 - 1

Product

# Product Occurence
1 histidine decarboxylase 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0076 6 E Amino acid transport and metabolism (E) Glutamate or tyrosine decarboxylase or a related PLP-dependent protein

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00282 6 Pyridoxal-dependent decarboxylase conserved domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG044234 6 histidine decarboxylase VF0936 Nutritional/Metabolic factor

Annotations of the 90 SwissProt hits

Annotation Number of occurrences
4-hydroxyphenylacetaldehyde synthase 1
Acidic amino acid decarboxylase GADL1 2
Aromatic-L-amino-acid decarboxylase 1
Aspartate 1-decarboxylase 1
Cysteine sulfinic acid decarboxylase 3
Glutamate decarboxylase 1
Glutamate decarboxylase 1 9
Glutamate decarboxylase 2 5
Glutamate decarboxylase-like protein FG08083 1
Histidine decarboxylase 14
Histidine decarboxylase (Fragment) 1
L-2,4-diaminobutyrate decarboxylase 2
L-aspartate decarboxylase 1
L-aspartate decarboxylase dtxS4 1
L-aspartate/L-glutamate decarboxylase 1
L-tryptophan decarboxylase cnsB 1
L-tyrosine/L-aspartate decarboxylase 1
O-phospho-L-seryl-tRNA:Cys-tRNA synthase 1
Phenylacetaldehyde synthase 1
Probable L-aspartate decarboxylase 8
Probable L-tyrosine/L-aspartate decarboxylase 20
Serine decarboxylase 1
Serine decarboxylase 1 1
Serine decarboxylase 2 1
Serine decarboxylase 3 1
Sphingosine-1-phosphate lyase 1
Sphingosine-1-phosphate lyase 1 4
Tryptophan decarboxylase 2
Tryptophan decarboxylase TDC1 1
Tyrosine decarboxylase 2 1
Tyrosine/DOPA decarboxylase 5 1

Protein length

Unique protein length 378

Protein length distribution