Orthogroup:group_270


Homologs in group_270

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05345 FBDBKF_05345 Morganella morganii S1 hns DNA-binding protein H-NS
EHELCC_12245 EHELCC_12245 Morganella morganii S2 hns DNA-binding protein H-NS
NLDBIP_12585 NLDBIP_12585 Morganella morganii S4 hns DNA-binding protein H-NS
LHKJJB_12445 LHKJJB_12445 Morganella morganii S3 hns DNA-binding protein H-NS
HKOGLL_11060 HKOGLL_11060 Morganella morganii S5 hns DNA-binding protein H-NS
F4V73_RS05800 F4V73_RS05800 Morganella psychrotolerans hns histone-like nucleoid-structuring protein H-NS
PMI_RS07205 PMI_RS07205 Proteus mirabilis HI4320 hns histone-like nucleoid-structuring protein H-NS
PMI_RS18630 PMI_RS18630 Proteus mirabilis HI4320 - H-NS family nucleoid-associated regulatory protein

Distribution of group_270 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_270 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_270

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_270.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hns 7
2 - 1

Product

# Product Occurence
1 DNA-binding protein H-NS 5
2 histone-like nucleoid-structuring protein H-NS 2
3 H-NS family nucleoid-associated regulatory protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2916 8 K Transcription (K) DNA-binding protein H-NS

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03746 8 DNA-binding protein H-NS - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00816 8 H-NS histone C-terminal domain
PF22470 8 H-NS histone-like proteins, N-terminal domain

Annotations of the 20 SwissProt hits

Annotation Number of occurrences
DNA-binding protein H-NS 12
DNA-binding protein H-NS homolog 2
DNA-binding protein H-NS, plasmid 1
DNA-binding protein StpA 5

Protein length

Min length 134
Max length 171
Mean length (sd) 140.1 (12.5)
Median length 136.0

Protein length distribution