Orthogroup:group_2611



Homologs in group_2611

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03505 FBDBKF_03505 Morganella morganii S1 cdaR Sugar diacid utilization regulator CdaR
EHELCC_07030 EHELCC_07030 Morganella morganii S2 cdaR Sugar diacid utilization regulator CdaR
NLDBIP_07355 NLDBIP_07355 Morganella morganii S4 cdaR Sugar diacid utilization regulator CdaR
LHKJJB_06890 LHKJJB_06890 Morganella morganii S3 cdaR Sugar diacid utilization regulator CdaR
HKOGLL_04040 HKOGLL_04040 Morganella morganii S5 cdaR Sugar diacid utilization regulator CdaR
F4V73_RS11395 F4V73_RS11395 Morganella psychrotolerans - sugar diacid recognition domain-containing protein

Distribution of group_2611 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2611 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2611

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2611.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cdaR 5
2 - 1

Product

# Product Occurence
1 Sugar diacid utilization regulator CdaR 5
2 sugar diacid recognition domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3835 6 KT Transcription (K)
Signal transduction mechanisms (T)
Sugar diacid utilization regulator CdaR

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02647 6 carbohydrate diacid regulator - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05651 6 Putative sugar diacid recognition
PF13556 6 PucR C-terminal helix-turn-helix domain
PF17853 6 GGDEF-like domain

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Carbohydrate diacid regulator 1
DNA-binding transcriptional activator AdeR 1
Proline-responsive transcriptional activator PutR 1
Purine catabolism regulatory protein 1
Uncharacterized protein HI_0093 1
Uncharacterized protein YsfB 1

Protein length

Min length 373
Max length 374
Mean length (sd) 373.2 (0.4)
Median length 373.0

Protein length distribution