Orthogroup:group_2585



Homologs in group_2585

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02885 FBDBKF_02885 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_03355 EHELCC_03355 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_00105 NLDBIP_00105 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_01930 LHKJJB_01930 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_01970 HKOGLL_01970 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS05330 F4V73_RS05330 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of group_2585 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2585 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2585

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2585.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acrR 5
2 - 1

Product

# Product Occurence
1 DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA 5
2 TetR/AcrR family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1309 6 K Transcription (K) DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K16138 6 TetR/AcrR family transcriptional regulator, repressor for uid operon - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00440 6 Bacterial regulatory proteins, tetR family
PF13977 6 BetI-type transcriptional repressor, C-terminal

Annotations of the 94 SwissProt hits

Annotation Number of occurrences
Fatty acid metabolism regulator protein 1
HTH-type transcriptional regulator AcrR 3
HTH-type transcriptional regulator BetI 37
HTH-type transcriptional regulator BetI 1 1
HTH-type transcriptional regulator BetI 2 1
HTH-type transcriptional regulator CymR 1
HTH-type transcriptional regulator QacR 3
HTH-type transcriptional regulator RutR 4
HTH-type transcriptional regulator TtgR 1
HTH-type transcriptional regulator UidR 4
HTH-type transcriptional repressor AcnR 4
HTH-type transcriptional repressor KstR 1
HTH-type transcriptional repressor KstR2 4
HTH-type transcriptional repressor Rv1474c 1
Nucleoid occlusion factor SlmA 20
Probable HTH-type transcriptional regulator ArpR 1
Probable HTH-type transcriptional regulator MepR 1
Probable HTH-type transcriptional regulator TtgR 1
Transcriptional repressor Mce3R 1
Uncharacterized HTH-type transcriptional regulator YfiR 1
Uncharacterized HTH-type transcriptional regulator YuxN 1
Uncharacterized HTH-type transcriptional regulator YvdT 1
Uncharacterized HTH-type transcriptional regulator YvkB 1

Protein length

Min length 196
Max length 200
Mean length (sd) 196.7 (1.6)
Median length 196.0

Protein length distribution