Orthogroup:group_2517


Homologs in group_2517

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02175 FBDBKF_02175 Morganella morganii S1 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB
EHELCC_02645 EHELCC_02645 Morganella morganii S2 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB
NLDBIP_00815 NLDBIP_00815 Morganella morganii S4 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB
LHKJJB_01220 LHKJJB_01220 Morganella morganii S3 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB
HKOGLL_01260 HKOGLL_01260 Morganella morganii S5 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB
F4V73_RS04545 F4V73_RS04545 Morganella psychrotolerans lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB

Distribution of group_2517 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2517 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2517

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2517.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lsrB 6

Product

# Product Occurence
1 autoinducer 2 ABC transporter substrate-binding protein LsrB 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1879 6 G Carbohydrate transport and metabolism (G) ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10555 6 AI-2 transport system substrate-binding protein ABC transporters
Quorum sensing		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13407 6 Periplasmic binding protein domain

Annotations of the 39 SwissProt hits

Annotation Number of occurrences
ABC transporter periplasmic-binding protein YphF 1
Autoinducer 2-binding protein LsrB 29
D-apiose import binding protein 4
D-ribose/D-allose-binding protein 1
Fructose import binding protein FruE 1
Ribose import binding protein RbsB 3

Protein length

Unique protein length 338

Protein length distribution