Orthogroup:group_2501


Homologs in group_2501

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01845 FBDBKF_01845 Morganella morganii S1 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
EHELCC_02315 EHELCC_02315 Morganella morganii S2 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
NLDBIP_01145 NLDBIP_01145 Morganella morganii S4 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
LHKJJB_00890 LHKJJB_00890 Morganella morganii S3 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
HKOGLL_00930 HKOGLL_00930 Morganella morganii S5 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
F4V73_RS04190 F4V73_RS04190 Morganella psychrotolerans - ABC transporter permease

Distribution of group_2501 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2501 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2501

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2501.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 araH 5
2 - 1

Product

# Product Occurence
1 Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component 5
2 ABC transporter permease 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1172 6 G Carbohydrate transport and metabolism (G) Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02057 6 simple sugar transport system permease protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02653 6 Branched-chain amino acid transport system / permease component

Annotations of the 82 SwissProt hits

Annotation Number of occurrences
Autoinducer 2 import system permease protein LsrC 28
Autoinducer 2 import system permease protein LsrD 28
D-allose transport system permease protein AlsC 1
Fructose import permease protein FrcC 1
Fructose import permease protein FruF 1
Fructose import permease protein FruG 1
Galactofuranose transporter permease protein YtfT 1
Galactose/methyl galactoside import permease protein MglC 4
Inner membrane ABC transporter permease protein YjfF 1
L-arabinose ABC transporter permease protein AraH 1
L-arabinose transport system permease protein AraH 2
Probable ABC transporter permease protein YphD 1
Probable ABC transporter permease protein y4mJ 1
Ribose import permease protein RbsC 5
Xylose transport system permease protein XylH 5
Xylose/arabinose import permease protein XylH 1

Protein length

Min length 315
Max length 316
Mean length (sd) 315.8 (0.4)
Median length 316.0

Protein length distribution