Orthogroup:group_2497


Homologs in group_2497

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01765 FBDBKF_01765 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_02235 EHELCC_02235 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_01225 NLDBIP_01225 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_00810 LHKJJB_00810 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_00850 HKOGLL_00850 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS04095 F4V73_RS04095 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of group_2497 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2497 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2497

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2497.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acrR 5
2 - 1

Product

# Product Occurence
1 DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA 5
2 TetR/AcrR family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1309 6 K Transcription (K) DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K18130 6 TetR/AcrR family transcriptional regulator, transcriptional repressor NalC beta-Lactam resistance -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00440 6 Bacterial regulatory proteins, tetR family
PF14246 6 AefR-like transcriptional repressor, C-terminal domain

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional regulator LmrA 1
HTH-type transcriptional regulator RutR 4
HTH-type transcriptional regulator SrpR 1
HTH-type transcriptional repressor AcnR 3
HTH-type transcriptional repressor ComR 1
HTH-type transcriptional repressor NicS 1
Uncharacterized HTH-type transcriptional regulator TtgW 1
Uncharacterized HTH-type transcriptional regulator YezE 1
Uncharacterized HTH-type transcriptional regulator YfiR 1
Uncharacterized HTH-type transcriptional regulator YhgD 1

Protein length

Min length 211
Max length 212
Mean length (sd) 211.8 (0.4)
Median length 212.0

Protein length distribution