Orthogroup:group_2478


Homologs in group_2478

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00940 FBDBKF_00940 Morganella morganii S1 rhtB Threonine/homoserine/homoserine lactone efflux protein
EHELCC_00605 EHELCC_00605 Morganella morganii S2 rhtB Threonine/homoserine/homoserine lactone efflux protein
NLDBIP_02855 NLDBIP_02855 Morganella morganii S4 rhtB Threonine/homoserine/homoserine lactone efflux protein
LHKJJB_04370 LHKJJB_04370 Morganella morganii S3 rhtB Threonine/homoserine/homoserine lactone efflux protein
HKOGLL_02675 HKOGLL_02675 Morganella morganii S5 rhtB Threonine/homoserine/homoserine lactone efflux protein
F4V73_RS06935 F4V73_RS06935 Morganella psychrotolerans - LysE family translocator

Distribution of group_2478 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2478 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2478

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2478.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhtB 5
2 - 1

Product

# Product Occurence
1 Threonine/homoserine/homoserine lactone efflux protein 5
2 LysE family translocator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1280 6 E Amino acid transport and metabolism (E) Threonine/homoserine/homoserine lactone efflux protein

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05834 6 homoserine/homoserine lactone efflux protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01810 6 LysE type translocator

Annotations of the 34 SwissProt hits

Annotation Number of occurrences
Homoserine/homoserine lactone efflux protein 6
Leucine efflux protein 17
Putative leucine efflux protein 1
Threonine efflux protein 4
Uncharacterized membrane protein HI_1307 1
Uncharacterized membrane protein PA4757 1
Uncharacterized membrane protein VC_0136 1
Uncharacterized membrane protein YahN 1
Uncharacterized membrane protein YrhP 1
Uncharacterized membrane protein slr1627 1

Protein length

Min length 214
Max length 215
Mean length (sd) 214.8 (0.4)
Median length 215.0

Protein length distribution