Orthogroup:group_2451



Homologs in group_2451

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20555 FBDBKF_20555 Morganella morganii S1 - helix-turn-helix transcriptional regulator
EHELCC_04300 EHELCC_04300 Morganella morganii S2 - helix-turn-helix transcriptional regulator
NLDBIP_04300 NLDBIP_04300 Morganella morganii S4 - helix-turn-helix transcriptional regulator
LHKJJB_10130 LHKJJB_10130 Morganella morganii S3 - helix-turn-helix transcriptional regulator
HKOGLL_08845 HKOGLL_08845 Morganella morganii S5 - helix-turn-helix transcriptional regulator
PMI_RS04680 PMI_RS04680 Proteus mirabilis HI4320 - helix-turn-helix transcriptional regulator
PMI_RS04685 PMI_RS04685 Proteus mirabilis HI4320 - helix-turn-helix transcriptional regulator

Distribution of group_2451 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2451 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2451

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2451.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 helix-turn-helix transcriptional regulator 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 7 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 6 Helix-turn-helix

Annotations of the 4 SwissProt hits

Annotation Number of occurrences
Cryptic phage CTXphi transcriptional repressor RstR 1
HTH-type transcriptional regulator Xre 1
Uncharacterized HTH-type transcriptional regulator R00410 1
Uncharacterized HTH-type transcriptional regulator Smed_0045 1

Protein length

Min length 85
Max length 87
Mean length (sd) 86.6 (0.8)
Median length 87.0

Protein length distribution