Orthogroup:group_2428


Homologs in group_2428

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19625 FBDBKF_19625 Morganella morganii S1 rhtB Threonine/homoserine/homoserine lactone efflux protein
EHELCC_16915 EHELCC_16915 Morganella morganii S2 rhtB Threonine/homoserine/homoserine lactone efflux protein
NLDBIP_17535 NLDBIP_17535 Morganella morganii S4 rhtB Threonine/homoserine/homoserine lactone efflux protein
LHKJJB_17455 LHKJJB_17455 Morganella morganii S3 rhtB Threonine/homoserine/homoserine lactone efflux protein
HKOGLL_17270 HKOGLL_17270 Morganella morganii S5 rhtB Threonine/homoserine/homoserine lactone efflux protein
F4V73_RS10420 F4V73_RS10420 Morganella psychrotolerans - LysE family transporter
F4V73_RS13380 F4V73_RS13380 Morganella psychrotolerans - LysE family translocator

Distribution of group_2428 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2428 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2428

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2428.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhtB 5
2 - 2

Product

# Product Occurence
1 Threonine/homoserine/homoserine lactone efflux protein 5
2 LysE family transporter 1
3 LysE family translocator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1280 7 E Amino acid transport and metabolism (E) Threonine/homoserine/homoserine lactone efflux protein

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05835 6 threonine efflux protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01810 7 LysE type translocator

Annotations of the 40 SwissProt hits

Annotation Number of occurrences
Chemotactic transduction protein ChpE 1
Cysteine/O-acetylserine efflux protein 5
Homoserine/homoserine lactone efflux protein 6
Leucine efflux protein 17
Putative leucine efflux protein 1
Threonine efflux protein 4
Uncharacterized membrane protein HI_1307 1
Uncharacterized membrane protein PA4757 1
Uncharacterized membrane protein VC_0136 1
Uncharacterized membrane protein YahN 1
Uncharacterized membrane protein YrhP 1
Uncharacterized membrane protein slr1627 1

Protein length

Min length 204
Max length 211
Mean length (sd) 210.0 (2.6)
Median length 211.0

Protein length distribution