Orthogroup:group_2419



Homologs in group_2419

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19530 FBDBKF_19530 Morganella morganii S1 ubiC chorismate lyase
EHELCC_16475 EHELCC_16475 Morganella morganii S2 ubiC chorismate lyase
NLDBIP_16685 NLDBIP_16685 Morganella morganii S4 ubiC chorismate lyase
LHKJJB_16785 LHKJJB_16785 Morganella morganii S3 ubiC chorismate lyase
HKOGLL_18830 HKOGLL_18830 Morganella morganii S5 ubiC chorismate lyase
F4V73_RS18595 F4V73_RS18595 Morganella psychrotolerans ubiC chorismate lyase
PMI_RS13570 PMI_RS13570 Proteus mirabilis HI4320 ubiC chorismate lyase

Distribution of group_2419 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2419 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2419

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2419.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ubiC 7

Product

# Product Occurence
1 chorismate lyase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3161 7 H Coenzyme transport and metabolism (H) 4-hydroxybenzoate synthetase (chorismate-pyruvate lyase)

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04345 7 Chorismate lyase

Annotations of the 138 SwissProt hits

Annotation Number of occurrences
Chorismate pyruvate-lyase 65
Probable chorismate pyruvate-lyase 68
Probable chorismate pyruvate-lyase 1 2
Probable chorismate pyruvate-lyase 2 3

Protein length

Min length 166
Max length 174
Mean length (sd) 167.6 (3.0)
Median length 166.0

Protein length distribution