Orthogroup:group_2414


Homologs in group_2414

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19500 FBDBKF_19500 Morganella morganii S1 edd phosphogluconate dehydratase
EHELCC_16445 EHELCC_16445 Morganella morganii S2 edd phosphogluconate dehydratase
NLDBIP_16655 NLDBIP_16655 Morganella morganii S4 edd phosphogluconate dehydratase
LHKJJB_16815 LHKJJB_16815 Morganella morganii S3 edd phosphogluconate dehydratase
HKOGLL_18800 HKOGLL_18800 Morganella morganii S5 edd phosphogluconate dehydratase
F4V73_RS18625 F4V73_RS18625 Morganella psychrotolerans edd phosphogluconate dehydratase
PMI_RS13605 PMI_RS13605 Proteus mirabilis HI4320 edd phosphogluconate dehydratase

Distribution of group_2414 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2414 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2414

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2414.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 edd 7

Product

# Product Occurence
1 phosphogluconate dehydratase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0129 7 EG Amino acid transport and metabolism (E)
Carbohydrate transport and metabolism (G)		 Dihydroxyacid dehydratase/phosphogluconate dehydratase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00920 7 Dehydratase family

Annotations of the 548 SwissProt hits

Annotation Number of occurrences
6-deoxy-6-sulfo-D-gluconate dehydratase 1
Dihydroxy-acid dehydratase 513
Dihydroxy-acid dehydratase 1 11
Dihydroxy-acid dehydratase 2 10
Dihydroxy-acid dehydratase 3 4
L-arabinonate dehydratase 1
Phosphogluconate dehydratase 7
Putative dehydratase IlvD1 1

Protein length

Min length 611
Max length 619
Mean length (sd) 617.7 (3.0)
Median length 619.0

Protein length distribution