Orthogroup:group_2396


Homologs in group_2396

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19230 FBDBKF_19230 Morganella morganii S1 rplB 50S ribosomal protein L2
EHELCC_18975 EHELCC_18975 Morganella morganii S2 rplB 50S ribosomal protein L2
NLDBIP_18990 NLDBIP_18990 Morganella morganii S4 rplB 50S ribosomal protein L2
LHKJJB_18845 LHKJJB_18845 Morganella morganii S3 rplB 50S ribosomal protein L2
HKOGLL_18580 HKOGLL_18580 Morganella morganii S5 rplB 50S ribosomal protein L2
F4V73_RS18935 F4V73_RS18935 Morganella psychrotolerans rplB 50S ribosomal protein L2
PMI_RS16165 PMI_RS16165 Proteus mirabilis HI4320 rplB 50S ribosomal protein L2

Distribution of group_2396 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2396 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2396

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2396.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplB 7

Product

# Product Occurence
1 50S ribosomal protein L2 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0090 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L2

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02886 7 large subunit ribosomal protein L2 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00181 7 Ribosomal Proteins L2, RNA binding domain
PF03947 7 Ribosomal Proteins L2, C-terminal domain

Annotations of the 510 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein uL2 510

Protein length

Unique protein length 274

Protein length distribution