Orthogroup:group_2392


Homologs in group_2392

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19210 FBDBKF_19210 Morganella morganii S1 rplP 50S ribosomal protein L16
EHELCC_18955 EHELCC_18955 Morganella morganii S2 rplP 50S ribosomal protein L16
NLDBIP_18970 NLDBIP_18970 Morganella morganii S4 rplP 50S ribosomal protein L16
LHKJJB_18825 LHKJJB_18825 Morganella morganii S3 rplP 50S ribosomal protein L16
HKOGLL_18560 HKOGLL_18560 Morganella morganii S5 rplP 50S ribosomal protein L16
F4V73_RS18955 F4V73_RS18955 Morganella psychrotolerans rplP 50S ribosomal protein L16
PMI_RS16185 PMI_RS16185 Proteus mirabilis HI4320 rplP 50S ribosomal protein L16

Distribution of group_2392 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2392 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2392

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2392.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplP 7

Product

# Product Occurence
1 50S ribosomal protein L16 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0197 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L16/L10AE

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02878 7 large subunit ribosomal protein L16 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00252 7 Ribosomal protein L16p/L10e

Annotations of the 512 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein uL16 445
Large ribosomal subunit protein uL16c 67

Protein length

Unique protein length 136

Protein length distribution