Orthogroup:group_2385


Homologs in group_2385

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19175 FBDBKF_19175 Morganella morganii S1 - Small ribosomal subunit protein uS8
EHELCC_18920 EHELCC_18920 Morganella morganii S2 - Small ribosomal subunit protein uS8
NLDBIP_18935 NLDBIP_18935 Morganella morganii S4 - Small ribosomal subunit protein uS8
LHKJJB_18790 LHKJJB_18790 Morganella morganii S3 - Small ribosomal subunit protein uS8
HKOGLL_18525 HKOGLL_18525 Morganella morganii S5 - Small ribosomal subunit protein uS8
F4V73_RS18990 F4V73_RS18990 Morganella psychrotolerans rpsH 30S ribosomal protein S8
PMI_RS16220 PMI_RS16220 Proteus mirabilis HI4320 rpsH 30S ribosomal protein S8

Distribution of group_2385 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2385 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2385

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2385.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 5
2 rpsH 2

Product

# Product Occurence
1 Small ribosomal subunit protein uS8 5
2 30S ribosomal protein S8 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0096 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S8

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02994 7 small subunit ribosomal protein S8 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00410 7 Ribosomal protein S8

Annotations of the 543 SwissProt hits

Annotation Number of occurrences
Small ribosomal subunit protein uS8 538
Small ribosomal subunit protein uS8c 5

Protein length

Unique protein length 130

Protein length distribution