Orthogroup:group_2381


Homologs in group_2381

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19155 FBDBKF_19155 Morganella morganii S1 rpmD 50S ribosomal protein L30
EHELCC_18900 EHELCC_18900 Morganella morganii S2 rpmD 50S ribosomal protein L30
NLDBIP_18915 NLDBIP_18915 Morganella morganii S4 rpmD 50S ribosomal protein L30
LHKJJB_18770 LHKJJB_18770 Morganella morganii S3 rpmD 50S ribosomal protein L30
HKOGLL_18505 HKOGLL_18505 Morganella morganii S5 rpmD 50S ribosomal protein L30
F4V73_RS19010 F4V73_RS19010 Morganella psychrotolerans rpmD 50S ribosomal protein L30
PMI_RS16240 PMI_RS16240 Proteus mirabilis HI4320 rpmD 50S ribosomal protein L30

Distribution of group_2381 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2381 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2381

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2381.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpmD 7

Product

# Product Occurence
1 50S ribosomal protein L30 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1841 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L30/L7E

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02907 7 large subunit ribosomal protein L30 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00327 7 Ribosomal protein L30p/L7e

Annotations of the 552 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein uL30 552

Protein length

Unique protein length 59

Protein length distribution