Orthogroup:group_2379


Homologs in group_2379

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19145 FBDBKF_19145 Morganella morganii S1 secY preprotein translocase subunit SecY
EHELCC_18890 EHELCC_18890 Morganella morganii S2 secY preprotein translocase subunit SecY
NLDBIP_18905 NLDBIP_18905 Morganella morganii S4 secY preprotein translocase subunit SecY
LHKJJB_18760 LHKJJB_18760 Morganella morganii S3 secY preprotein translocase subunit SecY
HKOGLL_18495 HKOGLL_18495 Morganella morganii S5 secY preprotein translocase subunit SecY
F4V73_RS19020 F4V73_RS19020 Morganella psychrotolerans secY preprotein translocase subunit SecY
PMI_RS16250 PMI_RS16250 Proteus mirabilis HI4320 secY preprotein translocase subunit SecY

Distribution of group_2379 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2379 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2379

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2379.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 secY 7

Product

# Product Occurence
1 preprotein translocase subunit SecY 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0201 7 U Intracellular trafficking, secretion, and vesicular transport (U) Preprotein translocase subunit SecY

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03076 7 preprotein translocase subunit SecY Quorum sensing
Protein export
Bacterial secretion system		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00344 7 SecY

Annotations of the 115 SwissProt hits

Annotation Number of occurrences
Accessory Sec system protein translocase subunit SecY2 23
Preprotein translocase subunit SCY1, chloroplastic 1
Preprotein translocase subunit SCY2, chloroplastic 1
Preprotein translocase subunit SECY, chloroplastic 4
Protein translocase subunit SecY 80
Protein translocase subunit SecY (Fragment) 4
Protein translocase subunit SecY 1 1
Protein translocase subunit SecY 2 1

Protein length

Min length 440
Max length 443
Mean length (sd) 442.6 (1.1)
Median length 443.0

Protein length distribution