Orthogroup:group_2318


Homologs in group_2318

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17805 FBDBKF_17805 Morganella morganii S1 holD DNA polymerase III, psi subunit
EHELCC_09830 EHELCC_09830 Morganella morganii S2 holD DNA polymerase III, psi subunit
NLDBIP_10210 NLDBIP_10210 Morganella morganii S4 holD DNA polymerase III, psi subunit
LHKJJB_07545 LHKJJB_07545 Morganella morganii S3 holD DNA polymerase III, psi subunit
HKOGLL_07095 HKOGLL_07095 Morganella morganii S5 holD DNA polymerase III, psi subunit
F4V73_RS15160 F4V73_RS15160 Morganella psychrotolerans - DNA polymerase III subunit psi
PMI_RS12330 PMI_RS12330 Proteus mirabilis HI4320 - DNA polymerase III subunit psi

Distribution of group_2318 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2318 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2318

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2318.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 holD 5
2 - 2

Product

# Product Occurence
1 DNA polymerase III, psi subunit 5
2 DNA polymerase III subunit psi 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3050 7 L Replication, recombination and repair (L) DNA polymerase III, psi subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02344 7 DNA polymerase III subunit psi [EC:2.7.7.7] DNA replication
Mismatch repair
Homologous recombination		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03603 7 DNA polymerase III psi subunit

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
DNA polymerase III subunit psi 2

Protein length

Min length 130
Max length 136
Mean length (sd) 131.6 (2.7)
Median length 130.0

Protein length distribution