Orthogroup:group_2286


Homologs in group_2286

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17560 FBDBKF_17560 Morganella morganii S1 rplA 50S ribosomal protein L1
EHELCC_18045 EHELCC_18045 Morganella morganii S2 rplA 50S ribosomal protein L1
NLDBIP_18105 NLDBIP_18105 Morganella morganii S4 rplA 50S ribosomal protein L1
LHKJJB_18300 LHKJJB_18300 Morganella morganii S3 rplA 50S ribosomal protein L1
HKOGLL_17900 HKOGLL_17900 Morganella morganii S5 rplA 50S ribosomal protein L1
F4V73_RS14945 F4V73_RS14945 Morganella psychrotolerans rplA 50S ribosomal protein L1
PMI_RS13770 PMI_RS13770 Proteus mirabilis HI4320 rplA 50S ribosomal protein L1

Distribution of group_2286 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2286 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2286

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2286.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplA 7

Product

# Product Occurence
1 50S ribosomal protein L1 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0081 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L1

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02863 7 large subunit ribosomal protein L1 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00687 7 Ribosomal protein L1p/L10e family

Annotations of the 521 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein uL1 521

Protein length

Min length 233
Max length 234
Mean length (sd) 233.1 (0.4)
Median length 233.0

Protein length distribution