Orthogroup:group_2233


Homologs in group_2233

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17110 FBDBKF_17110 Morganella morganii S1 xseA exodeoxyribonuclease VII large subunit
EHELCC_01780 EHELCC_01780 Morganella morganii S2 xseA exodeoxyribonuclease VII large subunit
NLDBIP_01680 NLDBIP_01680 Morganella morganii S4 xseA exodeoxyribonuclease VII large subunit
LHKJJB_00355 LHKJJB_00355 Morganella morganii S3 xseA exodeoxyribonuclease VII large subunit
HKOGLL_00395 HKOGLL_00395 Morganella morganii S5 xseA exodeoxyribonuclease VII large subunit
F4V73_RS05870 F4V73_RS05870 Morganella psychrotolerans xseA exodeoxyribonuclease VII large subunit
PMI_RS07530 PMI_RS07530 Proteus mirabilis HI4320 xseA exodeoxyribonuclease VII large subunit

Distribution of group_2233 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2233 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2233

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2233.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 xseA 7

Product

# Product Occurence
1 exodeoxyribonuclease VII large subunit 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1570 7 L Replication, recombination and repair (L) Exonuclease VII, large subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03601 7 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Mismatch repair -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02601 7 Exonuclease VII, large subunit
PF13742 7 OB-fold nucleic acid binding domain

Annotations of the 420 SwissProt hits

Annotation Number of occurrences
Exodeoxyribonuclease 7 large subunit 420

Protein length

Min length 458
Max length 462
Mean length (sd) 458.6 (1.5)
Median length 458.0

Protein length distribution