Orthogroup:group_2230


Homologs in group_2230

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17065 FBDBKF_17065 Morganella morganii S1 dusA tRNA dihydrouridine(20/20a) synthase DusA
EHELCC_16525 EHELCC_16525 Morganella morganii S2 dusA tRNA dihydrouridine(20/20a) synthase DusA
NLDBIP_16735 NLDBIP_16735 Morganella morganii S4 dusA tRNA dihydrouridine(20/20a) synthase DusA
LHKJJB_16735 LHKJJB_16735 Morganella morganii S3 dusA tRNA dihydrouridine(20/20a) synthase DusA
HKOGLL_18880 HKOGLL_18880 Morganella morganii S5 dusA tRNA dihydrouridine(20/20a) synthase DusA
F4V73_RS18545 F4V73_RS18545 Morganella psychrotolerans dusA tRNA dihydrouridine(20/20a) synthase DusA
PMI_RS13500 PMI_RS13500 Proteus mirabilis HI4320 dusA tRNA dihydrouridine(20/20a) synthase DusA

Distribution of group_2230 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2230 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2230

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2230.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dusA 7

Product

# Product Occurence
1 tRNA dihydrouridine(20/20a) synthase DusA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0042 7 J Translation, ribosomal structure and biogenesis (J) tRNA-dihydrouridine synthase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05539 7 tRNA-dihydrouridine synthase A [EC:1.-.-.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01207 7 Dihydrouridine synthase (Dus)

Annotations of the 136 SwissProt hits

Annotation Number of occurrences
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit 5
Probable tRNA-dihydrouridine synthase 23
Probable tRNA-dihydrouridine synthase 1 2
Probable tRNA-dihydrouridine synthase 2 1
Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 1
tRNA-dihydrouridine synthase B 23
tRNA-dihydrouridine(16) synthase 22
tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] 2
tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 3
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 2
tRNA-dihydrouridine(20/20a) synthase 23
tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] 2
tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like 2
tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 17
tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 8

Protein length

Min length 344
Max length 348
Mean length (sd) 347.4 (1.5)
Median length 348.0

Protein length distribution