Orthogroup:group_2221


Homologs in group_2221

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16980 FBDBKF_16980 Morganella morganii S1 metR HTH-type transcriptional regulator MetR
EHELCC_16610 EHELCC_16610 Morganella morganii S2 metR HTH-type transcriptional regulator MetR
NLDBIP_16820 NLDBIP_16820 Morganella morganii S4 metR HTH-type transcriptional regulator MetR
LHKJJB_16650 LHKJJB_16650 Morganella morganii S3 metR HTH-type transcriptional regulator MetR
HKOGLL_17615 HKOGLL_17615 Morganella morganii S5 metR HTH-type transcriptional regulator MetR
F4V73_RS18440 F4V73_RS18440 Morganella psychrotolerans metR HTH-type transcriptional regulator MetR
PMI_RS17535 PMI_RS17535 Proteus mirabilis HI4320 metR HTH-type transcriptional regulator MetR

Distribution of group_2221 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2221 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2221

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2221.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 metR 7

Product

# Product Occurence
1 HTH-type transcriptional regulator MetR 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0583 7 K Transcription (K) DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03576 7 LysR family transcriptional regulator, regulator for metE and metH - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00126 7 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 7 LysR substrate binding domain

Annotations of the 258 SwissProt hits

Annotation Number of occurrences
Carbapenem-hydrolyzing beta-lactamase transcriptional activator 2
DNA-binding transcriptional dual regulator OxyR 1
Glycine cleavage system transcriptional activator 3
Glycine cleavage system transcriptional activator homolog 1
HTH-type transcriptional activator AllS 11
HTH-type transcriptional activator AmpR 4
HTH-type transcriptional activator BauR 1
HTH-type transcriptional activator IlvY 3
HTH-type transcriptional regulator AbaB 1
HTH-type transcriptional regulator AbgR 1
HTH-type transcriptional regulator AlsR 1
HTH-type transcriptional regulator ArgP 29
HTH-type transcriptional regulator BenM 1
HTH-type transcriptional regulator BlaA 1
HTH-type transcriptional regulator BsdA 1
HTH-type transcriptional regulator CatM 1
HTH-type transcriptional regulator CatR 1
HTH-type transcriptional regulator CbbR 4
HTH-type transcriptional regulator CfxR 1
HTH-type transcriptional regulator CrgA 2
HTH-type transcriptional regulator CynR 2
HTH-type transcriptional regulator CysB 7
HTH-type transcriptional regulator CysB (Fragment) 1
HTH-type transcriptional regulator CysL 1
HTH-type transcriptional regulator CzcR 7
HTH-type transcriptional regulator DgdR 1
HTH-type transcriptional regulator DsdC 1
HTH-type transcriptional regulator EstR 1
HTH-type transcriptional regulator GbpR 2
HTH-type transcriptional regulator GltR 1
HTH-type transcriptional regulator HdfR 48
HTH-type transcriptional regulator IlvY 1
HTH-type transcriptional regulator LeuO 1
HTH-type transcriptional regulator LysG 3
HTH-type transcriptional regulator MetR 7
HTH-type transcriptional regulator NmoR 1
HTH-type transcriptional regulator PcaQ 2
HTH-type transcriptional regulator PerR 1
HTH-type transcriptional regulator PgrR 1
HTH-type transcriptional regulator PtxR 1
HTH-type transcriptional regulator ShiR 1
HTH-type transcriptional regulator SoxR 1
HTH-type transcriptional regulator SsuR 1
HTH-type transcriptional regulator TdcA 3
HTH-type transcriptional regulator TdfR 1
HTH-type transcriptional regulator TfdS 1
HTH-type transcriptional regulator TfdT 1
HTH-type transcriptional regulator TrpI 1
HTH-type transcriptional regulator TsaR 1
HTH-type transcriptional regulator TtuA 2
HTH-type transcriptional regulator XapR 1
HTH-type transcriptional regulator YhaJ 1
HTH-type transcriptional regulator YofA 2
HTH-type transcriptional regulator YtlI 1
HTH-type transcriptional regulator cbl 2
HTH-type transcriptional repressor PA14_22550 1
Hca operon transcriptional activator HcaR 1
Hydrogen peroxide-inducible genes activator 5
Iron-regulated virulence regulatory protein IrgB 2
Lysine export transcriptional regulatory protein LysG 2
Nitrogen assimilation regulatory protein nac 2
Probable HTH-type transcriptional regulator LrrA 1
Probable HTH-type transcriptional regulator YhaJ 1
Probable RuBisCO transcriptional regulator 13
Probable cat1 operon transcriptional activator 1
Probable hydrogen peroxide-inducible genes activator 2
Probable hydrogen peroxide-inducible genes activator (Fragment) 1
Probable nitrogen assimilation transcriptional activator 2
Putative HTH-type transcriptional regulator protein PtxE (Fragment) 1
Putative transcriptional regulator 1
Regulatory protein NocR 2
RuBisCO operon transcriptional regulator 2
SDS degradation transcriptional activation protein 1
Small neutral protease regulatory protein 3
Transcriptional activator protein LysR 1
Transcriptional dual regulator GltC 1
Uncharacterized HTH-type transcriptional regulator HI_0775 1
Uncharacterized HTH-type transcriptional regulator MJ0300 1
Uncharacterized HTH-type transcriptional regulator MT0391 1
Uncharacterized HTH-type transcriptional regulator MT2340 1
Uncharacterized HTH-type transcriptional regulator Mb2303c 1
Uncharacterized HTH-type transcriptional regulator Rv0377 1
Uncharacterized HTH-type transcriptional regulator Rv2282c 1
Uncharacterized HTH-type transcriptional regulator YafC 1
Uncharacterized HTH-type transcriptional regulator YbhD 1
Uncharacterized HTH-type transcriptional regulator YcaN 1
Uncharacterized HTH-type transcriptional regulator YcgK 1
Uncharacterized HTH-type transcriptional regulator YdcI 1
Uncharacterized HTH-type transcriptional regulator YdhB 2
Uncharacterized HTH-type transcriptional regulator YeeY 1
Uncharacterized HTH-type transcriptional regulator YeiE 3
Uncharacterized HTH-type transcriptional regulator YfeR 2
Uncharacterized HTH-type transcriptional regulator YfiE 1
Uncharacterized HTH-type transcriptional regulator YgfI 1
Uncharacterized HTH-type transcriptional regulator YkuM 1
Uncharacterized HTH-type transcriptional regulator YneJ 1
Uncharacterized HTH-type transcriptional regulator YnfL 1
Uncharacterized HTH-type transcriptional regulator YusT 1
Uncharacterized HTH-type transcriptional regulator YvbU 1
Uncharacterized HTH-type transcriptional regulator YwbI 1
Uncharacterized HTH-type transcriptional regulator YwqM 1
Uncharacterized HTH-type transcriptional regulator YybE 1
Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region 1
Uncharacterized HTH-type transcriptional regulator y4mQ 1

Protein length

Min length 317
Max length 320
Mean length (sd) 319.6 (1.1)
Median length 320.0

Protein length distribution