Orthogroup:group_2212


Homologs in group_2212

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16915 FBDBKF_16915 Morganella morganii S1 tatC Sec-independent protein translocase subunit TatC
EHELCC_16675 EHELCC_16675 Morganella morganii S2 tatC Sec-independent protein translocase subunit TatC
NLDBIP_16885 NLDBIP_16885 Morganella morganii S4 tatC Sec-independent protein translocase subunit TatC
LHKJJB_16585 LHKJJB_16585 Morganella morganii S3 tatC Sec-independent protein translocase subunit TatC
HKOGLL_17550 HKOGLL_17550 Morganella morganii S5 tatC Sec-independent protein translocase subunit TatC
F4V73_RS18385 F4V73_RS18385 Morganella psychrotolerans tatC Sec-independent protein translocase subunit TatC
PMI_RS17600 PMI_RS17600 Proteus mirabilis HI4320 tatC Sec-independent protein translocase subunit TatC

Distribution of group_2212 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2212 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2212

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2212.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tatC 7

Product

# Product Occurence
1 Sec-independent protein translocase subunit TatC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0805 7 U Intracellular trafficking, secretion, and vesicular transport (U) Twin-arginine protein secretion pathway component TatC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03118 7 sec-independent protein translocase protein TatC Protein export
Bacterial secretion system		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00902 7 Sec-independent protein translocase protein (TatC)

Annotations of the 52 SwissProt hits

Annotation Number of occurrences
Sec-independent protein translocase protein TATC, chloroplastic 4
Sec-independent protein translocase protein TatC 34
Sec-independent protein translocase protein TatCd 1
Sec-independent protein translocase protein TatCo 1
Sec-independent protein translocase protein TatCt 1
Sec-independent protein translocase protein TatCy 1
Uncharacterized tatC-like protein ycf43 6
Uncharacterized tatC-like protein ymf16 4

Protein length

Min length 251
Max length 261
Mean length (sd) 252.4 (3.8)
Median length 251.0

Protein length distribution