Orthogroup:group_2186


Homologs in group_2186

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16460 FBDBKF_16460 Morganella morganii S1 yegQ tRNA 5-hydroxyuridine modification protein YegQ
EHELCC_08325 EHELCC_08325 Morganella morganii S2 yegQ tRNA 5-hydroxyuridine modification protein YegQ
NLDBIP_08650 NLDBIP_08650 Morganella morganii S4 yegQ tRNA 5-hydroxyuridine modification protein YegQ
LHKJJB_05615 LHKJJB_05615 Morganella morganii S3 yegQ tRNA 5-hydroxyuridine modification protein YegQ
HKOGLL_05300 HKOGLL_05300 Morganella morganii S5 yegQ tRNA 5-hydroxyuridine modification protein YegQ
F4V73_RS02975 F4V73_RS02975 Morganella psychrotolerans yegQ tRNA 5-hydroxyuridine modification protein YegQ
PMI_RS07755 PMI_RS07755 Proteus mirabilis HI4320 yegQ tRNA 5-hydroxyuridine modification protein YegQ

Distribution of group_2186 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2186 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2186

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2186.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yegQ 7

Product

# Product Occurence
1 tRNA 5-hydroxyuridine modification protein YegQ 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0826 7 J Translation, ribosomal structure and biogenesis (J) 23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K08303 7 U32 family peptidase [EC:3.4.-.-] Epithelial cell signaling in Helicobacter pylori infection -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01136 7 Peptidase family U32
PF16325 7 Peptidase family U32 C-terminal domain

Annotations of the 11 SwissProt hits

Annotation Number of occurrences
23S rRNA 5-hydroxycytidine C2501 synthase 1
Collagenase 1
Collagenase (Fragment) 1
Ubiquinone biosynthesis protein UbiU 1
Uncharacterized protease MJ0090 1
tRNA hydroxylation protein P 4
tRNA hydroxylation protein P1 1
tRNA hydroxylation protein P2 1

Protein length

Min length 459
Max length 463
Mean length (sd) 462.4 (1.5)
Median length 463.0

Protein length distribution