Orthogroup:group_2170


Homologs in group_2170

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16330 FBDBKF_16330 Morganella morganii S1 envC Murein hydrolase activator EnvC
EHELCC_16365 EHELCC_16365 Morganella morganii S2 envC Murein hydrolase activator EnvC
NLDBIP_16975 NLDBIP_16975 Morganella morganii S4 envC Murein hydrolase activator EnvC
LHKJJB_16895 LHKJJB_16895 Morganella morganii S3 envC Murein hydrolase activator EnvC
HKOGLL_16945 HKOGLL_16945 Morganella morganii S5 envC Murein hydrolase activator EnvC
F4V73_RS17250 F4V73_RS17250 Morganella psychrotolerans envC murein hydrolase activator EnvC
PMI_RS15725 PMI_RS15725 Proteus mirabilis HI4320 envC murein hydrolase activator EnvC

Distribution of group_2170 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2170 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2170

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2170.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 envC 7

Product

# Product Occurence
1 Murein hydrolase activator EnvC 5
2 murein hydrolase activator EnvC 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4942 7 D Cell cycle control, cell division, chromosome partitioning (D) Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K22719 7 murein hydrolase activator - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01551 7 Peptidase family M23

Annotations of the 34 SwissProt hits

Annotation Number of occurrences
Cell division protein DipM 1
Glycyl-glycine endopeptidase ALE-1 1
Glycyl-glycine endopeptidase LytM 8
Lipoprotein NlpD (Fragment) 1
Lipoprotein NlpD/LppB homolog 1
Lysostaphin 2
Murein DD-endopeptidase MepM 3
Murein hydrolase activator EnvC 1
Murein hydrolase activator NlpD 5
Outer membrane antigenic lipoprotein B 1
Outer membrane antigenic lipoprotein B (Fragment) 1
Probable tape measure protein 1
Protein NlpD/LppB homolog 1
SPbeta prophage-derived uncharacterized transglycosylase YomI 1
Uncharacterized lipoprotein YgeR 1
Uncharacterized metalloprotease BUsg_310 1
Uncharacterized metalloprotease HI_0409 1
Uncharacterized metalloprotease bbp_296 1
Uncharacterized protein HI_0756 1
Uncharacterized protein NMB1333 1

Protein length

Min length 403
Max length 430
Mean length (sd) 424.0 (9.3)
Median length 427.0

Protein length distribution