Orthogroup:group_2160


Homologs in group_2160

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16250 FBDBKF_16250 Morganella morganii S1 rpmG 50S ribosomal protein L33
EHELCC_16285 EHELCC_16285 Morganella morganii S2 rpmG 50S ribosomal protein L33
NLDBIP_17055 NLDBIP_17055 Morganella morganii S4 rpmG 50S ribosomal protein L33
LHKJJB_16975 LHKJJB_16975 Morganella morganii S3 rpmG 50S ribosomal protein L33
HKOGLL_16865 HKOGLL_16865 Morganella morganii S5 rpmG 50S ribosomal protein L33
F4V73_RS17345 F4V73_RS17345 Morganella psychrotolerans rpmG 50S ribosomal protein L33
PMI_RS15615 PMI_RS15615 Proteus mirabilis HI4320 rpmG 50S ribosomal protein L33

Distribution of group_2160 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2160 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2160

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2160.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpmG 7

Product

# Product Occurence
1 50S ribosomal protein L33 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0267 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L33

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02913 7 large subunit ribosomal protein L33 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00471 7 Ribosomal protein L33

Annotations of the 521 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein bL33 423
Large ribosomal subunit protein bL33A 27
Large ribosomal subunit protein bL33B 39
Large ribosomal subunit protein bL33C 22
Large ribosomal subunit protein bL33D 1
Large ribosomal subunit protein bL33c 5
Large ribosomal subunit protein bL33m 4

Protein length

Unique protein length 55

Protein length distribution