Orthogroup:group_2127


Homologs in group_2127

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15985 FBDBKF_15985 Morganella morganii S1 mscK mechanosensitive channel MscK
EHELCC_18590 EHELCC_18590 Morganella morganii S2 mscK mechanosensitive channel MscK
NLDBIP_17420 NLDBIP_17420 Morganella morganii S4 mscK mechanosensitive channel MscK
LHKJJB_17240 LHKJJB_17240 Morganella morganii S3 mscK mechanosensitive channel MscK
HKOGLL_17155 HKOGLL_17155 Morganella morganii S5 mscK mechanosensitive channel MscK
F4V73_RS16325 F4V73_RS16325 Morganella psychrotolerans mscK mechanosensitive channel MscK
PMI_RS00655 PMI_RS00655 Proteus mirabilis HI4320 mscK mechanosensitive channel MscK

Distribution of group_2127 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2127 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2127

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2127.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mscK 7

Product

# Product Occurence
1 mechanosensitive channel MscK 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3264 7 M Cell wall/membrane/envelope biogenesis (M) Small-conductance mechanosensitive channel MscK

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05802 7 potassium-dependent mechanosensitive channel - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00924 7 Mechanosensitive ion channel, beta-domain
PF12794 7 Mechanosensitive ion channel inner membrane domain 1
PF12795 7 Mechanosensitive ion channel porin domain
PF21082 7 Mechanosensitive ion channel MscS, C-terminal
PF21088 7 Mechanosensitive ion channel, transmembrane helices 2/3

Annotations of the 26 SwissProt hits

Annotation Number of occurrences
Large-conductance mechanosensitive channel MscMJLR 1
Low conductance mechanosensitive channel YnaI 2
Mechanosensitive channel MscK 1
Mechanosensitive ion channel protein 1, mitochondrial 1
Miniconductance mechanosensitive channel MscM 1
Small-conductance mechanosensitive channel 7
Small-conductance mechanosensitive channel MscMJ 1
Uncharacterized MscS family protein AF_1546 1
Uncharacterized MscS family protein BU452 1
Uncharacterized MscS family protein BUsg_437 1
Uncharacterized MscS family protein HI_0195.1 1
Uncharacterized MscS family protein HP_0415 1
Uncharacterized MscS family protein YfkC 1
Uncharacterized MscS family protein YhdY 1
Uncharacterized MscS family protein YkuT 1
Uncharacterized MscS family protein aq_812 1
Uncharacterized MscS family protein bbp_402 1
Uncharacterized MscS family protein jhp_0969 1
Uncharacterized MscS family protein slr0639 1

Protein length

Min length 1136
Max length 1142
Mean length (sd) 1136.9 (2.3)
Median length 1136.0

Protein length distribution