Orthogroup:group_2113


Homologs in group_2113

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15885 FBDBKF_15885 Morganella morganii S1 lon endopeptidase La
EHELCC_18485 EHELCC_18485 Morganella morganii S2 lon endopeptidase La
NLDBIP_17320 NLDBIP_17320 Morganella morganii S4 lon endopeptidase La
LHKJJB_17340 LHKJJB_17340 Morganella morganii S3 lon endopeptidase La
HKOGLL_17055 HKOGLL_17055 Morganella morganii S5 lon endopeptidase La
F4V73_RS16430 F4V73_RS16430 Morganella psychrotolerans lon endopeptidase La
PMI_RS00565 PMI_RS00565 Proteus mirabilis HI4320 lon endopeptidase La

Distribution of group_2113 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2113 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2113

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2113.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lon 7

Product

# Product Occurence
1 endopeptidase La 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0466 7 O Posttranslational modification, protein turnover, chaperones (O) ATP-dependent Lon protease, bacterial type

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01338 7 ATP-dependent Lon protease [EC:3.4.21.53] Cell cycle - Caulobacter -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00004 7 ATPase family associated with various cellular activities (AAA)
PF02190 7 ATP-dependent protease La (LON) substrate-binding domain
PF05362 7 Lon protease (S16) C-terminal proteolytic domain
PF22667 7 Lon protease AAA+ ATPase lid domain

Annotations of the 215 SwissProt hits

Annotation Number of occurrences
Archaeal Lon protease 9
DNA repair protein RadA 1
Holliday junction branch migration complex subunit RuvB 3
Lon protease 106
Lon protease 1 11
Lon protease 2 11
Lon protease 3 1
Lon protease 4 1
Lon protease homolog 1
Lon protease homolog 1, mitochondrial 1
Lon protease homolog 2, peroxisomal 27
Lon protease homolog 3, mitochondrial 1
Lon protease homolog 4, chloroplastic/mitochondrial 1
Lon protease homolog, mitochondrial 28
Lon protease homolog, mitochondrial (Fragment) 1
Lon protease homolog, mitochondrial 1 1
Lon protease homolog, mitochondrial 2 1
Lon-like protease BrxL 1
Midasin 1
Origin recognition complex subunit 1 1
Putative Lon protease homolog 2
Replication factor C large subunit 3
Uncharacterized protein MJ1318 1
Uncharacterized protein YlbL 1

Protein length

Min length 784
Max length 785
Mean length (sd) 784.9 (0.4)
Median length 785.0

Protein length distribution