Orthogroup:group_2086


Homologs in group_2086

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15600 FBDBKF_15600 Morganella morganii S1 yidC membrane protein insertase YidC
EHELCC_15960 EHELCC_15960 Morganella morganii S2 yidC membrane protein insertase YidC
NLDBIP_16410 NLDBIP_16410 Morganella morganii S4 yidC membrane protein insertase YidC
LHKJJB_16395 LHKJJB_16395 Morganella morganii S3 yidC membrane protein insertase YidC
HKOGLL_16165 HKOGLL_16165 Morganella morganii S5 yidC membrane protein insertase YidC
F4V73_RS17555 F4V73_RS17555 Morganella psychrotolerans yidC membrane protein insertase YidC
PMI_RS15485 PMI_RS15485 Proteus mirabilis HI4320 yidC membrane protein insertase YidC

Distribution of group_2086 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2086 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2086

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2086.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yidC 7

Product

# Product Occurence
1 membrane protein insertase YidC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0706 7 M Cell wall/membrane/envelope biogenesis (M) Membrane protein insertase Oxa1/YidC/SpoIIIJ

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03217 7 YidC/Oxa1 family membrane protein insertase Quorum sensing
Protein export
Bacterial secretion system		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02096 7 60Kd inner membrane protein
PF14849 7 YidC periplasmic domain

Annotations of the 453 SwissProt hits

Annotation Number of occurrences
ALBINO3-like protein 1, chloroplastic 1
Cytochrome c oxidase assembly protein COX18, mitochondrial 3
Inner membrane ALBINO3-like protein 1, chloroplastic 1
Inner membrane ALBINO3-like protein 2, chloroplastic 1
Inner membrane protein ALBINO3, chloroplastic 1
Inner membrane protein PPF-1, chloroplastic 1
Membrane protein insertase MisCA 1
Membrane protein insertase MisCB 1
Membrane protein insertase YidC 392
Membrane protein insertase YidC (Fragment) 2
Membrane protein insertase YidC 1 20
Membrane protein insertase YidC 2 20
Mitochondrial inner membrane protein OXA1 3
Mitochondrial inner membrane protein OXA1-like 1
Mitochondrial inner membrane protein OXA1L 3
Mitochondrial inner membrane protein oxa1-1 1
Mitochondrial inner membrane protein oxa1-2 1

Protein length

Min length 540
Max length 546
Mean length (sd) 540.9 (2.3)
Median length 540.0

Protein length distribution