Orthogroup:group_1998


Homologs in group_1998

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15035 FBDBKF_15035 Morganella morganii S1 yggT Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family
EHELCC_11210 EHELCC_11210 Morganella morganii S2 yggT Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family
NLDBIP_11555 NLDBIP_11555 Morganella morganii S4 yggT Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family
LHKJJB_11415 LHKJJB_11415 Morganella morganii S3 yggT Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family
HKOGLL_10025 HKOGLL_10025 Morganella morganii S5 yggT Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family
F4V73_RS12415 F4V73_RS12415 Morganella psychrotolerans - YggT family protein
PMI_RS01595 PMI_RS01595 Proteus mirabilis HI4320 - YggT family protein

Distribution of group_1998 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1998 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1998

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1998.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yggT 5
2 - 2

Product

# Product Occurence
1 Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family 5
2 YggT family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0762 7 O Posttranslational modification, protein turnover, chaperones (O) Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02221 7 YggT family protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02325 7 YGGT family

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein Atu2659.1 1
Uncharacterized protein HI_1036 1
Uncharacterized protein PA0392 1
Uncharacterized protein YggT 3
Uncharacterized protein in proC 3'region 1

Protein length

Min length 182
Max length 187
Mean length (sd) 182.7 (1.9)
Median length 182.0

Protein length distribution