Orthogroup:group_1972



Homologs in group_1972

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14790 FBDBKF_14790 Morganella morganii S1 potE Serine transporter YbeC, amino acid:H+ symporter family
EHELCC_15595 EHELCC_15595 Morganella morganii S2 potE Serine transporter YbeC, amino acid:H+ symporter family
NLDBIP_16125 NLDBIP_16125 Morganella morganii S4 potE Serine transporter YbeC, amino acid:H+ symporter family
LHKJJB_15715 LHKJJB_15715 Morganella morganii S3 potE Serine transporter YbeC, amino acid:H+ symporter family
HKOGLL_14835 HKOGLL_14835 Morganella morganii S5 potE Serine transporter YbeC, amino acid:H+ symporter family
F4V73_RS07585 F4V73_RS07585 Morganella psychrotolerans - APC family permease
PMI_RS04140 PMI_RS04140 Proteus mirabilis HI4320 - APC family permease

Distribution of group_1972 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1972 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1972

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1972.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 potE 5
2 - 2

Product

# Product Occurence
1 Serine transporter YbeC, amino acid:H+ symporter family 5
2 APC family permease 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0531 7 E Amino acid transport and metabolism (E) Serine transporter YbeC, amino acid:H+ symporter family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K14052 7 putrescine importer - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00324 1 Amino acid permease
PF13520 6 Amino acid permease

Annotations of the 127 SwissProt hits

Annotation Number of occurrences
Amino-acid permease AapA 1
Amino-acid permease GAP1 1
Amino-acid permease GAP3 1
Amino-acid permease GAP5 1
Amino-acid permease RocC 1
Amino-acid permease RocE 1
Arginine/agmatine antiporter 2
Arginine/ornithine antiporter 1
Aromatic amino acid transport protein AroP 7
Asc-type amino acid transporter 1 3
Branched-chain amino acid permease BcaP 2
Cationic amino acid transporter 1 1
Cationic amino acid transporter 2 7
Cationic amino acid transporter 2, vacuolar 1
Cationic amino acid transporter 3 3
Cationic amino acid transporter 3, mitochondrial 1
Cationic amino acid transporter 4 2
Cationic amino acid transporter 4, vacuolar 1
Cationic amino acid transporter 5 1
Cationic amino acid transporter 6, chloroplastic 1
Cationic amino acid transporter 7, chloroplastic 1
Cationic amino acid transporter 8, vacuolar 1
Cationic amino acid transporter 9, chloroplastic 1
Cystine/glutamate transporter 3
D-serine/D-alanine/glycine transporter 3
Dicarboxylic amino acid permease 1
Gamma-aminobutyric acid permease 1
Glutamate/serine transporter AimA 1
High affinity cationic amino acid transporter 1 3
Histidine permease HisP 1
L-asparagine permease 2
L-asparagine permease 1 3
L-asparagine permease 2 3
L-methionine/branched-chain amino acid exporter YjeH 1
Low-affinity putrescine importer PlaP 2
Lysine-specific permease LysP 2
Methylthioribose transporter 1
Phenylalanine-specific permease 1
Polyamine transporter PUT1 2
Probable GABA permease 1
Probable S-methylmethionine permease 1
Probable cationic amino acid transporter 1
Probable fructoselysine/psicoselysine transporter FrlA 2
Probable low-affinity putrescine importer PlaP (Fragment) 1
Probable threonine/serine transporter YbxG 1
Probable transport protein YifK 3
Proline-specific permease ProY 4
Putative histidine permease 1
Putative polyamine transporter 1
Putrescine importer PuuP 1
Serine/threonine exchanger SteT 1
Sexual differentiation process putative amino-acid permease isp5 1
Solute carrier family 7 member 12 1
Solute carrier family 7 member 13 1
Solute carrier family 7 member 14 3
Thiamine transporter thi9 1
Tryptophan permease 1
Uncharacterized amino acid permease YbgF 1
Uncharacterized amino acid permease YecA 1
Uncharacterized amino acid permease YtnA 1
Uncharacterized amino acid permease YvbW 1
Uncharacterized amino-acid permease C1039.01 1
Uncharacterized amino-acid permease C359.01 1
Uncharacterized amino-acid permease C584.13 1
Uncharacterized amino-acid permease C74.04 1
Uncharacterized amino-acid permease C965.11c 1
Uncharacterized amino-acid permease P7G5.06 1
Uncharacterized amino-acid permease PB2B2.01 1
Uncharacterized protein MJ0609 1
Uncharacterized transporter MT2031 1
Uncharacterized transporter MT2055 1
Uncharacterized transporter Mb2001c 1
Uncharacterized transporter Mb2022c 1
Uncharacterized transporter Rv1979c 1
Uncharacterized transporter Rv1999c 1
Uncharacterized transporter YcgH 1
Uncharacterized transporter YdgF 1
Y+L amino acid transporter 1 3
Y+L amino acid transporter 2 6

Protein length

Unique protein length 459

Protein length distribution