Orthogroup:group_1958


Homologs in group_1958

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14680 FBDBKF_14680 Morganella morganii S1 tatD metal-dependent hydrolase
EHELCC_15485 EHELCC_15485 Morganella morganii S2 tatD metal-dependent hydrolase
NLDBIP_16015 NLDBIP_16015 Morganella morganii S4 tatD metal-dependent hydrolase
LHKJJB_15825 LHKJJB_15825 Morganella morganii S3 tatD metal-dependent hydrolase
HKOGLL_14945 HKOGLL_14945 Morganella morganii S5 tatD metal-dependent hydrolase
F4V73_RS07475 F4V73_RS07475 Morganella psychrotolerans - metal-dependent hydrolase
PMI_RS04260 PMI_RS04260 Proteus mirabilis HI4320 - metal-dependent hydrolase

Distribution of group_1958 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1958 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1958

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1958.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tatD 5
2 - 2

Product

# Product Occurence
1 metal-dependent hydrolase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0084 7 N Cell motility (N) 3'->5' ssDNA/RNA exonuclease TatD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03424 7 TatD DNase family protein [EC:3.1.21.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01026 7 TatD related DNase

Annotations of the 62 SwissProt hits

Annotation Number of occurrences
3'-5' ssDNA/RNA exonuclease TatD 26
D-aminoacyl-tRNA deacylase 1
Deoxyribonuclease TATDN1 5
Deoxyribonuclease Tat-D 1
Putative deoxyribonuclease TATDN1 homolog 3
Putative deoxyribonuclease TATDN2 1
Putative deoxyribonuclease TATDN3 3
Putative deoxyribonuclease tatdn3 1
Putative deoxyribonuclease tatdn3-A 1
Putative deoxyribonuclease tatdn3-B 1
Uncharacterized deoxyribonuclease YMR262W 1
Uncharacterized metal-dependent hydrolase BU355 1
Uncharacterized metal-dependent hydrolase BUsg_343 1
Uncharacterized metal-dependent hydrolase HI_0081 1
Uncharacterized metal-dependent hydrolase HI_0454 1
Uncharacterized metal-dependent hydrolase HI_1664 1
Uncharacterized metal-dependent hydrolase MG009 1
Uncharacterized metal-dependent hydrolase MJ0761 1
Uncharacterized metal-dependent hydrolase MJ1582 1
Uncharacterized metal-dependent hydrolase MPN_009 1
Uncharacterized metal-dependent hydrolase TatD 1
Uncharacterized metal-dependent hydrolase UU017 1
Uncharacterized metal-dependent hydrolase YabD 1
Uncharacterized metal-dependent hydrolase YcfH 3
Uncharacterized metal-dependent hydrolase YjjV 1
Uncharacterized metal-dependent hydrolase bbp_325 1
Uncharacterized protein MJ1383 1

Protein length

Min length 259
Max length 261
Mean length (sd) 259.3 (0.8)
Median length 259.0

Protein length distribution