Orthogroup:group_1937



Homologs in group_1937

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14545 FBDBKF_14545 Morganella morganii S1 icd NADP-dependent isocitrate dehydrogenase
EHELCC_15350 EHELCC_15350 Morganella morganii S2 icd NADP-dependent isocitrate dehydrogenase
NLDBIP_15880 NLDBIP_15880 Morganella morganii S4 icd NADP-dependent isocitrate dehydrogenase
LHKJJB_15960 LHKJJB_15960 Morganella morganii S3 icd NADP-dependent isocitrate dehydrogenase
HKOGLL_15080 HKOGLL_15080 Morganella morganii S5 icd NADP-dependent isocitrate dehydrogenase
F4V73_RS07340 F4V73_RS07340 Morganella psychrotolerans icd NADP-dependent isocitrate dehydrogenase
PMI_RS04380 PMI_RS04380 Proteus mirabilis HI4320 icd NADP-dependent isocitrate dehydrogenase

Distribution of group_1937 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1937 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1937

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1937.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 icd 7

Product

# Product Occurence
1 NADP-dependent isocitrate dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0538 7 C Energy production and conversion (C) Isocitrate dehydrogenase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00180 7 Isocitrate/isopropylmalate dehydrogenase

Annotations of the 400 SwissProt hits

Annotation Number of occurrences
3-isopropylmalate dehydrogenase 286
3-isopropylmalate dehydrogenase (Fragment) 2
3-isopropylmalate dehydrogenase 1 3
3-isopropylmalate dehydrogenase 1, chloroplastic 1
3-isopropylmalate dehydrogenase 2 3
3-isopropylmalate dehydrogenase 2, chloroplastic 1
3-isopropylmalate dehydrogenase 3, chloroplastic 1
3-isopropylmalate dehydrogenase A 1
3-isopropylmalate dehydrogenase AMT6 1
3-isopropylmalate dehydrogenase B 1
3-isopropylmalate dehydrogenase gloI 1
3-isopropylmalate dehydrogenase, chloroplastic 2
3-isopropylmalate/3-methylmalate dehydrogenase 1
Cytosolic isocitrate dehydrogenase [NADP] 1
D-malate dehydrogenase [decarboxylating] 1
Homoisocitrate dehydrogenase 2
Homoisocitrate dehydrogenase, mitochondrial 1
Isocitrate dehydrogenase [NADP] 32
Isocitrate dehydrogenase [NADP] 1 5
Isocitrate dehydrogenase [NADP] cytoplasmic 1
Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) 1
Isocitrate dehydrogenase [NADP], mitochondrial 2
Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial 1
Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial 1
Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial 1
Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial 1
Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial 1
Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial 1
Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial 1
Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial 4
Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial 3
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial 6
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (Fragment) 1
Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial 5
Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial 2
Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial 2
Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (Fragment) 1
Isocitrate/homoisocitrate dehydrogenase 3
Isopropyl malate dehydrogenase htyC 1
Probable isocitrate dehydrogenase [NADP], mitochondrial 1
Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial 2
Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial 2
Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial 1
Probable tartrate dehydrogenase/decarboxylase 1
Probable tartrate dehydrogenase/decarboxylase TtuC 2
Probable tartrate dehydrogenase/decarboxylase TtuC' 3
Protein DlpA 1
Putative isocitrate dehydrogenase [NAD] subunit-like 4 1
Tartrate dehydrogenase/decarboxylase 1

Protein length

Unique protein length 417

Protein length distribution