Orthogroup:group_1888


Homologs in group_1888

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14110 FBDBKF_14110 Morganella morganii S1 nuoM NADH-quinone oxidoreductase subunit M
EHELCC_08170 EHELCC_08170 Morganella morganii S2 nuoM NADH-quinone oxidoreductase subunit M
NLDBIP_08495 NLDBIP_08495 Morganella morganii S4 nuoM NADH-quinone oxidoreductase subunit M
LHKJJB_05770 LHKJJB_05770 Morganella morganii S3 nuoM NADH-quinone oxidoreductase subunit M
HKOGLL_05145 HKOGLL_05145 Morganella morganii S5 nuoM NADH-quinone oxidoreductase subunit M
F4V73_RS02825 F4V73_RS02825 Morganella psychrotolerans nuoM NADH-quinone oxidoreductase subunit M
PMI_RS08590 PMI_RS08590 Proteus mirabilis HI4320 nuoM NADH-quinone oxidoreductase subunit M

Distribution of group_1888 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1888 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1888

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1888.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nuoM 7

Product

# Product Occurence
1 NADH-quinone oxidoreductase subunit M 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1008 7 C Energy production and conversion (C) NADH:ubiquinone oxidoreductase subunit 4 (chain M)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00342 7 NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] Oxidative phosphorylation
Metabolic pathways		 NADH:quinone oxidoreductase, prokaryotes

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00361 7 Proton-conducting membrane transporter

Annotations of the 555 SwissProt hits

Annotation Number of occurrences
F(420)H(2) dehydrogenase subunit L 1
F(420)H(2) dehydrogenase subunit M 1
Hydrogenase-4 component B 1
Hydrogenase-4 component F 1
Hydrogenase-4 component F homolog 1
NAD(P)H-quinone oxidoreductase chain 4 20
NAD(P)H-quinone oxidoreductase chain 4 1 10
NAD(P)H-quinone oxidoreductase chain 4 2 9
NAD(P)H-quinone oxidoreductase chain 4 3 2
NAD(P)H-quinone oxidoreductase chain 4, chloroplastic 92
NAD(P)H-quinone oxidoreductase chain 4-1 1
NAD(P)H-quinone oxidoreductase chain 4-2 2
NAD(P)H-quinone oxidoreductase chain 4-3 1
NAD(P)H-quinone oxidoreductase chain 5 2
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic 90
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (Fragment) 4
NAD(P)H-quinone oxidoreductase subunit 5, organellar chromatophore 1 1
NADH-quinone oxidoreductase chain 12 1
NADH-quinone oxidoreductase chain 13 1
NADH-quinone oxidoreductase subunit 13 1
NADH-quinone oxidoreductase subunit L 13
NADH-quinone oxidoreductase subunit M 14
NADH-quinone oxidoreductase subunit N 34
NADH-quinone oxidoreductase subunit N 1 4
NADH-quinone oxidoreductase subunit N 2 6
NADH-quinone oxidoreductase subunit N 3 1
NADH-ubiquinone oxidoreductase chain 4 105
NADH-ubiquinone oxidoreductase chain 4 (Fragment) 34
NADH-ubiquinone oxidoreductase chain 5 21
Na(+)/H(+) antiporter subunit A 2
Na(+)/H(+) antiporter subunit A1 19
Na(+)/H(+) antiporter subunit D 2
Na(+)/H(+) antiporter subunit D1 18
Na+/H+-antiporter, MnhD subunit 1
Probable K(+)/H(+) antiporter subunit A/B 1
Putative antiporter subunit mnhA2 19
Putative antiporter subunit mnhD2 19

Protein length

Min length 506
Max length 509
Mean length (sd) 506.4 (1.1)
Median length 506.0

Protein length distribution