Orthogroup:group_185


Homologs in group_185

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07340 FBDBKF_07340 Morganella morganii S1 ompA porin OmpA
FBDBKF_20375 FBDBKF_20375 Morganella morganii S1 ompA OmpA family protein
EHELCC_03630 EHELCC_03630 Morganella morganii S2 ompA porin OmpA
NLDBIP_03630 NLDBIP_03630 Morganella morganii S4 ompA porin OmpA
LHKJJB_09460 LHKJJB_09460 Morganella morganii S3 ompA porin OmpA
HKOGLL_09515 HKOGLL_09515 Morganella morganii S5 ompA porin OmpA
F4V73_RS01525 F4V73_RS01525 Morganella psychrotolerans ompA porin OmpA
F4V73_RS19125 F4V73_RS19125 Morganella psychrotolerans - OmpA family protein
PMI_RS03855 PMI_RS03855 Proteus mirabilis HI4320 ompA porin OmpA

Distribution of group_185 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_185 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_185

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_185.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ompA 8
2 - 1

Product

# Product Occurence
1 porin OmpA 7
2 OmpA family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2885 9 M Cell wall/membrane/envelope biogenesis (M) Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03286 7 OmpA-OmpF porin, OOP family - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00691 9 OmpA family
PF01389 7 OmpA-like transmembrane domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG043544 7 porin OmpA VF1158 Adherence

Annotations of the 62 SwissProt hits

Annotation Number of occurrences
Outer membrane porin F 3
Outer membrane protein 1
Outer membrane protein 41 1
Outer membrane protein A 16
Outer membrane protein A (Fragment) 6
Outer membrane protein Omp38 2
Outer membrane protein P.III 1
Outer membrane protein P5 3
Outer membrane protein class 4 2
Outer-membrane lipoprotein YfiB 1
Peptidoglycan-associated lipoprotein 16
Peptidoglycan-binding protein ArfA 4
Photosystem I P700 chlorophyll a apoprotein A2 1
Probable lipoprotein YiaD 1
Putative lipoprotein YfiB 1
Sodium-type flagellar protein MotY 2
Trimeric autotransporter adhesin- and peptidoglycan-associated protein A 1

Protein length

Min length 172
Max length 362
Mean length (sd) 317.2 (80.9)
Median length 357.0

Protein length distribution