Orthogroup:group_1823



Homologs in group_1823

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13510 FBDBKF_13510 Morganella morganii S1 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
EHELCC_08585 EHELCC_08585 Morganella morganii S2 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
NLDBIP_08910 NLDBIP_08910 Morganella morganii S4 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
LHKJJB_05355 LHKJJB_05355 Morganella morganii S3 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
HKOGLL_05560 HKOGLL_05560 Morganella morganii S5 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
F4V73_RS03250 F4V73_RS03250 Morganella psychrotolerans - LuxR C-terminal-related transcriptional regulator
PMI_RS07560 PMI_RS07560 Proteus mirabilis HI4320 - response regulator

Distribution of group_1823 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1823 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1823

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1823.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 citB 5
2 - 2

Product

# Product Occurence
1 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 5
2 LuxR C-terminal-related transcriptional regulator 1
3 response regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2197 7 TK Signal transduction mechanisms (T)
Transcription (K)
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00072 7 Response regulator receiver domain
PF00196 7 Bacterial regulatory proteins, luxR family

Annotations of the 497 SwissProt hits

Annotation Number of occurrences
Acid tolerance regulatory protein ActR 2
Aerobic respiration control protein ArcA homolog 1
Alginate biosynthesis transcriptional regulatory protein AlgB 3
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP 1
Alkaline phosphatase synthesis transcriptional regulatory protein SphR 1
Cell cycle response regulator CtrA 9
Cell cycle transcriptional regulator CtrA 2
Chemotaxis protein CheY 12
Chemotaxis protein CheY-3 2
CsgBAC operon transcriptional regulatory protein 1
Cyclic di-GMP phosphodiesterase TM_0186 1
Cyclic di-GMP phosphodiesterase response regulator RpfG 1
DNA-binding dual master transcriptional regulator RpaA 2
DNA-binding response regulator MtrA 6
DNA-binding transcriptional activator DevR/DosR 2
DNA-binding transcriptional activator EvgA 4
Fimbriae Z protein 3
Glycerol metabolism activator 2
HTH-type transcriptional activator RamA 1
HTH-type transcriptional regulator AlkS 3
HTH-type transcriptional regulator MalT 59
Histidine kinase P4 1
Hydrogenase transcriptional regulatory protein HupR1 1
KDP operon transcriptional regulatory protein KdpE 1
Light-activated DNA-binding protein EL222 1
Luminescence regulatory protein LuxO 2
Methanol utilization control regulatory protein MoxX 1
Nitrate/nitrite response regulator protein NarL 4
Nitrate/nitrite response regulator protein NarP 1
Nitrate/nitrite response regulator protein homolog 1
Nodulation protein W 1
Oxygen regulatory protein NreC 18
Phosphate regulon transcriptional regulatory protein PhoB 8
Photosynthetic apparatus regulatory protein RegA 1
Positive alginate biosynthesis regulatory protein 1
Probable C4-dicarboxylate response regulator DctR 3
Probable csgAB operon transcriptional regulatory protein 1
Probable transcriptional regulator ycf29 2
Probable transcriptional regulatory protein NarL 2
Probable transcriptional regulatory protein SYNPCC7002_A0851 1
Probable transcriptional regulatory protein SgaR 1
Probable transcriptional regulatory protein TcrX 1
Protein CcdB 1
Protein PilH 1
Protein RcaC 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 31
Protein-glutamate methylesterase/protein-glutamine glutaminase 1 28
Protein-glutamate methylesterase/protein-glutamine glutaminase 2 21
Protein-glutamate methylesterase/protein-glutamine glutaminase 3 6
Protein-glutamate methylesterase/protein-glutamine glutaminase 4 2
Protein-glutamate methylesterase/protein-glutamine glutaminase 5 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 6 1
Protein-glutamate methylesterase/protein-glutamine glutaminase of group 1 operon 2
Putative HTH-type transcriptional regulator MT0914 1
Putative HTH-type transcriptional regulator Mb0914c 1
Putative HTH-type transcriptional regulator Rv0890c 1
Putative HTH-type transcriptional regulator YhjB 1
Putative transcriptional regulator 1
Regulatory protein LuxO 4
Response regulator ArlR 11
Response regulator GacA 4
Response regulator MprA 14
Response regulator PleD 2
Response regulator RR06 2
Response regulator RamR 1
Response regulator Rre1 1
Response regulator SsrB 1
Response regulator UvrY 4
Response regulator protein CarR 1
Response regulator protein GraR 16
Response regulator protein PmrA 1
Response regulator protein TmoT 1
Response regulator protein TodT 3
Response regulator protein VraR 12
Sensory transduction protein LytR 2
Sensory transduction protein LytT 5
Sensory transduction protein RegX3 1
Spore germination protein GerE 1
Sporulation initiation phosphotransferase F 2
Stage 0 sporulation protein A homolog 1
Tetrathionate response regulatory protein TtrR 1
TorCAD operon transcriptional regulatory protein TorR 2
Transcriptional activator protein AnoR 1
Transcriptional activator protein CopR 1
Transcriptional activator protein CzcR 1
Transcriptional activator protein ExaE 1
Transcriptional activator protein PhzR 1
Transcriptional regulatory protein AfsQ1 1
Transcriptional regulatory protein BasR 2
Transcriptional regulatory protein BtsR 6
Transcriptional regulatory protein CiaR 2
Transcriptional regulatory protein CitT 1
Transcriptional regulatory protein ComA 1
Transcriptional regulatory protein CseB 2
Transcriptional regulatory protein DegU 2
Transcriptional regulatory protein DesR 1
Transcriptional regulatory protein DltR 2
Transcriptional regulatory protein FixJ 3
Transcriptional regulatory protein HprR 1
Transcriptional regulatory protein HptR 7
Transcriptional regulatory protein KdpE 3
Transcriptional regulatory protein LiaR 1
Transcriptional regulatory protein LnrK 1
Transcriptional regulatory protein MalR 1
Transcriptional regulatory protein MctR 1
Transcriptional regulatory protein PcoR 1
Transcriptional regulatory protein PdtaR 2
Transcriptional regulatory protein PhoP 3
Transcriptional regulatory protein PrrA 4
Transcriptional regulatory protein RcsB 7
Transcriptional regulatory protein ResD 1
Transcriptional regulatory protein SrrA 8
Transcriptional regulatory protein TcrA 2
Transcriptional regulatory protein TctD 2
Transcriptional regulatory protein TdiR 1
Transcriptional regulatory protein TrcR 1
Transcriptional regulatory protein UhpA 5
Transcriptional regulatory protein WalR 23
Transcriptional regulatory protein YdfI 1
Transcriptional regulatory protein YxdJ 1
Transcriptional regulatory protein-like BtsR 1
Two-component response regulator ARR22 1
Two-component response regulator PhoP 1
Two-component response regulator PprB 1
Uncharacterized 14.6 kDa protein in sodA1 3'region 1
Uncharacterized response regulatory protein SO_2823 1
Uncharacterized response regulatory protein VC_0693 1
Uncharacterized response regulatory protein VC_A0850 1
Uncharacterized response regulatory protein VV2_1193 1
Uncharacterized response regulatory protein YPO3287/y0902/YP_0397 1
Uncharacterized response regulatory protein YgeK 2
Uncharacterized transcriptional regulatory protein YclJ 1
Uncharacterized transcriptional regulatory protein YhcZ 1
Uncharacterized transcriptional regulatory protein YkoG 1
Uncharacterized transcriptional regulatory protein YvfU 1
Uncharacterized transcriptional regulatory protein YxjL 1
Virulence factors putative positive transcription regulator BvgA 3
Virulence transcriptional regulatory protein PhoP 8

Protein length

Min length 207
Max length 209
Mean length (sd) 208.7 (0.8)
Median length 209.0

Protein length distribution