Orthogroup:group_1808


Homologs in group_1808

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13415 FBDBKF_13415 Morganella morganii S1 rplT 50S ribosomal protein L20
EHELCC_08680 EHELCC_08680 Morganella morganii S2 rplT 50S ribosomal protein L20
NLDBIP_09005 NLDBIP_09005 Morganella morganii S4 rplT 50S ribosomal protein L20
LHKJJB_05260 LHKJJB_05260 Morganella morganii S3 rplT 50S ribosomal protein L20
HKOGLL_05655 HKOGLL_05655 Morganella morganii S5 rplT 50S ribosomal protein L20
F4V73_RS03350 F4V73_RS03350 Morganella psychrotolerans rplT 50S ribosomal protein L20
PMI_RS05040 PMI_RS05040 Proteus mirabilis HI4320 rplT 50S ribosomal protein L20

Distribution of group_1808 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1808 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1808

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1808.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplT 7

Product

# Product Occurence
1 50S ribosomal protein L20 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0292 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L20

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02887 7 large subunit ribosomal protein L20 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00453 7 Ribosomal protein L20

Annotations of the 522 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein bL20 522

Protein length

Unique protein length 118

Protein length distribution