Orthogroup:group_1805


Homologs in group_1805

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13395 FBDBKF_13395 Morganella morganii S1 ihfA integration host factor subunit alpha
EHELCC_08700 EHELCC_08700 Morganella morganii S2 ihfA integration host factor subunit alpha
NLDBIP_09025 NLDBIP_09025 Morganella morganii S4 ihfA integration host factor subunit alpha
LHKJJB_05240 LHKJJB_05240 Morganella morganii S3 ihfA integration host factor subunit alpha
HKOGLL_05675 HKOGLL_05675 Morganella morganii S5 ihfA integration host factor subunit alpha
F4V73_RS03365 F4V73_RS03365 Morganella psychrotolerans ihfA integration host factor subunit alpha
PMI_RS05055 PMI_RS05055 Proteus mirabilis HI4320 ihfA integration host factor subunit alpha

Distribution of group_1805 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1805 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1805

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1805.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ihfA 7

Product

# Product Occurence
1 integration host factor subunit alpha 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0776 7 L Replication, recombination and repair (L) Bacterial nucleoid DNA-binding protein IHF-alpha

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04764 7 integration host factor subunit alpha - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00216 7 Bacterial DNA-binding protein

Annotations of the 527 SwissProt hits

Annotation Number of occurrences
DNA-binding protein HRL53 1
DNA-binding protein HRm 1
DNA-binding protein HU 35
DNA-binding protein HU 1 1
DNA-binding protein HU 2 1
DNA-binding protein HU homolog 1
DNA-binding protein HU-1 2
DNA-binding protein HU-alpha 12
DNA-binding protein HU-beta 11
DNA-binding protein HU-beta 2 1
Integration host factor subunit alpha 281
Integration host factor subunit alpha (Fragment) 1
Integration host factor subunit alpha 1 1
Integration host factor subunit alpha 2 1
Integration host factor subunit beta 176
SPbeta prophage-derived DNA-binding protein HU 2 1

Protein length

Unique protein length 98

Protein length distribution