Orthogroup:group_1796


Homologs in group_1796

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13335 FBDBKF_13335 Morganella morganii S1 lplA Lipoate-protein ligase A
EHELCC_08760 EHELCC_08760 Morganella morganii S2 lplA Lipoate-protein ligase A
NLDBIP_09085 NLDBIP_09085 Morganella morganii S4 lplA Lipoate-protein ligase A
LHKJJB_05180 LHKJJB_05180 Morganella morganii S3 lplA Lipoate-protein ligase A
HKOGLL_05735 HKOGLL_05735 Morganella morganii S5 lplA Lipoate-protein ligase A
F4V73_RS03425 F4V73_RS03425 Morganella psychrotolerans - lipoate--protein ligase A
PMI_RS05110 PMI_RS05110 Proteus mirabilis HI4320 - lipoate--protein ligase A

Distribution of group_1796 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1796 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1796

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1796.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lplA 5
2 - 2

Product

# Product Occurence
1 Lipoate-protein ligase A 5
2 lipoate--protein ligase A 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0095 7 H Coenzyme transport and metabolism (H) Lipoate-protein ligase A

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03800 7 lipoate---protein ligase [EC:6.3.1.20] Lipoic acid metabolism
Metabolic pathways
Biosynthesis of cofactors		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF10437 7 Bacterial lipoate protein ligase C-terminus
PF21948 7 Lipoyl protein ligase A/B catalytic domain

Annotations of the 98 SwissProt hits

Annotation Number of occurrences
Lipoate--protein ligase 1
Lipoate--protein ligase 1 2
Lipoate--protein ligase 2 1
Lipoate-protein ligase A 66
Lipoate-protein ligase A subunit 1 1
Lipoate-protein ligase LplJ 1
Lipoyl amidotransferase LIPT1, mitochondrial 3
Octanoyltransferase LipM 15
Probable lipoate-protein ligase A 2
Putative lipoate-protein ligase A 6

Protein length

Min length 338
Max length 339
Mean length (sd) 338.1 (0.4)
Median length 338.0

Protein length distribution