Orthogroup:group_1759


Homologs in group_1759

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12250 FBDBKF_12250 Morganella morganii S1 hslU HslU--HslV peptidase ATPase subunit
EHELCC_14055 EHELCC_14055 Morganella morganii S2 hslU HslU--HslV peptidase ATPase subunit
NLDBIP_15150 NLDBIP_15150 Morganella morganii S4 hslU HslU--HslV peptidase ATPase subunit
LHKJJB_15460 LHKJJB_15460 Morganella morganii S3 hslU HslU--HslV peptidase ATPase subunit
HKOGLL_14580 HKOGLL_14580 Morganella morganii S5 hslU HslU--HslV peptidase ATPase subunit
F4V73_RS17080 F4V73_RS17080 Morganella psychrotolerans hslU HslU--HslV peptidase ATPase subunit
PMI_RS15900 PMI_RS15900 Proteus mirabilis HI4320 hslU HslU--HslV peptidase ATPase subunit

Distribution of group_1759 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1759 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1759

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1759.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hslU 7

Product

# Product Occurence
1 HslU--HslV peptidase ATPase subunit 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1220 7 O Posttranslational modification, protein turnover, chaperones (O) ATP-dependent protease HslVU (ClpYQ), ATPase subunit HslU

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03667 7 ATP-dependent HslUV protease ATP-binding subunit HslU - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00004 7 ATPase family associated with various cellular activities (AAA)
PF07724 7 AAA domain (Cdc48 subfamily)

Annotations of the 560 SwissProt hits

Annotation Number of occurrences
ATP-dependent Clp protease ATP-binding subunit ClpX 139
ATP-dependent Clp protease ATP-binding subunit ClpX 2 1
ATP-dependent protease ATPase subunit ClpY 4
ATP-dependent protease ATPase subunit HslU 413
ATP-dependent protease ATPase subunit HslU (Fragment) 1
ATP-dependent protease ATPase subunit HslU1 1
ATP-dependent protease ATPase subunit HslU2 1

Protein length

Min length 444
Max length 446
Mean length (sd) 444.3 (0.8)
Median length 444.0

Protein length distribution