Orthogroup:group_1728


Homologs in group_1728

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12060 FBDBKF_12060 Morganella morganii S1 recG ATP-dependent DNA helicase RecG
EHELCC_14245 EHELCC_14245 Morganella morganii S2 recG ATP-dependent DNA helicase RecG
NLDBIP_15340 NLDBIP_15340 Morganella morganii S4 recG ATP-dependent DNA helicase RecG
LHKJJB_15270 LHKJJB_15270 Morganella morganii S3 recG ATP-dependent DNA helicase RecG
HKOGLL_14390 HKOGLL_14390 Morganella morganii S5 recG ATP-dependent DNA helicase RecG
F4V73_RS14585 F4V73_RS14585 Morganella psychrotolerans recG ATP-dependent DNA helicase RecG
PMI_RS14165 PMI_RS14165 Proteus mirabilis HI4320 recG ATP-dependent DNA helicase RecG

Distribution of group_1728 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1728 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1728

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1728.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 recG 7

Product

# Product Occurence
1 ATP-dependent DNA helicase RecG 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1200 7 L Replication, recombination and repair (L) RecG-like helicase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03655 7 ATP-dependent DNA helicase RecG [EC:5.6.2.4] Homologous recombination -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00270 7 DEAD/DEAH box helicase
PF00271 7 Helicase conserved C-terminal domain
PF17191 7 RecG wedge domain
PF19833 7 ATP-dependent DNA helicase RecG, domain 3, C-terminal

Annotations of the 271 SwissProt hits

Annotation Number of occurrences
ATP-dependent DNA helicase At3g02060, chloroplastic 1
ATP-dependent DNA helicase DDX31 2
ATP-dependent DNA helicase Hel308 4
ATP-dependent DNA helicase Q-like 4A 1
ATP-dependent DNA helicase Q-like 4B 1
ATP-dependent DNA helicase Q1 4
ATP-dependent DNA helicase RecG 27
ATP-dependent DNA helicase homolog RECG, chloroplastic 1
ATP-dependent DNA helicase hus2/rqh1 1
ATP-dependent RNA helicase CHR1 1
ATP-dependent RNA helicase DBP1 3
ATP-dependent RNA helicase DBP2 2
ATP-dependent RNA helicase DBP3 11
ATP-dependent RNA helicase DBP5 1
ATP-dependent RNA helicase DBP8 1
ATP-dependent RNA helicase DDX42 4
ATP-dependent RNA helicase DDX50 2
ATP-dependent RNA helicase DED1 8
ATP-dependent RNA helicase DRS1 1
ATP-dependent RNA helicase DbpA 1
ATP-dependent RNA helicase FAL1 14
ATP-dependent RNA helicase HAS1 9
ATP-dependent RNA helicase MSS116, mitochondrial 1
ATP-dependent RNA helicase ROK1 2
ATP-dependent RNA helicase RhlB 1
ATP-dependent RNA helicase dbp3 7
ATP-dependent RNA helicase dbp8 4
ATP-dependent RNA helicase ded1 3
ATP-dependent RNA helicase eIF4A 6
ATP-dependent RNA helicase fal-1 1
ATP-dependent RNA helicase fal1 7
ATP-dependent RNA helicase mss116, mitochondrial 1
ATP-dependent RNA helicase p62 1
ATP-dependent RNA helicase rok1 1
ATP-dependent rRNA helicase RRP3 2
DEAD-box ATP-dependent RNA helicase 24 1
DEAD-box ATP-dependent RNA helicase 27 1
DEAD-box ATP-dependent RNA helicase 3, chloroplastic 2
DEAD-box ATP-dependent RNA helicase 3A, chloroplastic 1
DEAD-box ATP-dependent RNA helicase 3B, chloroplastic 1
DEAD-box ATP-dependent RNA helicase 5 1
DEAD-box ATP-dependent RNA helicase 51 1
DEAD-box ATP-dependent RNA helicase 53, mitochondrial 1
DEAD-box ATP-dependent RNA helicase 57 1
DEAD-box ATP-dependent RNA helicase 7 2
DEAD-box ATP-dependent RNA helicase RhpA 2
Eukaryotic initiation factor 4A-III homolog 1
Nucleolar RNA helicase 2 3
Nucleolar RNA helicase 2-A 1
Nucleolar RNA helicase 2-B 1
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 2
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 1
Primosomal protein N' 9
Probable ATP-dependent RNA helicase DDX49 2
Probable ATP-dependent RNA helicase DDX60 1
Probable ATP-dependent RNA helicase Dbp45A 1
Probable ATP-dependent RNA helicase MJ0669 1
Probable ATP-dependent RNA helicase ddx18 1
Probable ATP-dependent RNA helicase pitchoune 1
Protein translocase subunit SecA 2 3
Putative ATP-dependent DNA helicase Q1 1
RQC trigger complex helicase SLH1 1
Transcription-repair-coupling factor 31
UvrABC system protein B 59

Protein length

Min length 693
Max length 695
Mean length (sd) 693.3 (0.8)
Median length 693.0

Protein length distribution