Orthogroup:group_1720


Homologs in group_1720

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12015 FBDBKF_12015 Morganella morganii S1 glyQ glycine--tRNA ligase subunit alpha
EHELCC_14290 EHELCC_14290 Morganella morganii S2 glyQ glycine--tRNA ligase subunit alpha
NLDBIP_15385 NLDBIP_15385 Morganella morganii S4 glyQ glycine--tRNA ligase subunit alpha
LHKJJB_15225 LHKJJB_15225 Morganella morganii S3 glyQ glycine--tRNA ligase subunit alpha
HKOGLL_14345 HKOGLL_14345 Morganella morganii S5 glyQ glycine--tRNA ligase subunit alpha
F4V73_RS14640 F4V73_RS14640 Morganella psychrotolerans glyQ glycine--tRNA ligase subunit alpha
PMI_RS14105 PMI_RS14105 Proteus mirabilis HI4320 glyQ glycine--tRNA ligase subunit alpha

Distribution of group_1720 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1720 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1720

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1720.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 glyQ 7

Product

# Product Occurence
1 glycine--tRNA ligase subunit alpha 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0752 7 J Translation, ribosomal structure and biogenesis (J) Glycyl-tRNA synthetase, alpha subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01878 7 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02091 7 Glycyl-tRNA synthetase alpha subunit

Annotations of the 394 SwissProt hits

Annotation Number of occurrences
Glycine--tRNA ligase 4
Glycine--tRNA ligase alpha subunit 389
Glycine--tRNA ligase, chloroplastic/mitochondrial 2 1

Protein length

Min length 301
Max length 302
Mean length (sd) 301.9 (0.4)
Median length 302.0

Protein length distribution