Orthogroup:group_1719



Homologs in group_1719

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12010 FBDBKF_12010 Morganella morganii S1 glyS Glycyl-tRNA synthetase, beta subunit
EHELCC_14295 EHELCC_14295 Morganella morganii S2 glyS Glycyl-tRNA synthetase, beta subunit
NLDBIP_15390 NLDBIP_15390 Morganella morganii S4 glyS Glycyl-tRNA synthetase, beta subunit
LHKJJB_15220 LHKJJB_15220 Morganella morganii S3 glyS Glycyl-tRNA synthetase, beta subunit
HKOGLL_14340 HKOGLL_14340 Morganella morganii S5 glyS Glycyl-tRNA synthetase, beta subunit
F4V73_RS14645 F4V73_RS14645 Morganella psychrotolerans glyS glycine--tRNA ligase subunit beta
PMI_RS14110 PMI_RS14110 Proteus mirabilis HI4320 glyS glycine--tRNA ligase subunit beta

Distribution of group_1719 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1719 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1719

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1719.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 glyS 7

Product

# Product Occurence
1 Glycyl-tRNA synthetase, beta subunit 5
2 glycine--tRNA ligase subunit beta 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0751 7 J Translation, ribosomal structure and biogenesis (J) Glycyl-tRNA synthetase, beta subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01879 7 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02092 7 Glycyl-tRNA synthetase beta subunit
PF05746 7 DALR anticodon binding domain

Annotations of the 354 SwissProt hits

Annotation Number of occurrences
Glycine--tRNA ligase 4
Glycine--tRNA ligase beta subunit 346
Glycine--tRNA ligase beta subunit (Fragment) 3
Glycine--tRNA ligase, chloroplastic/mitochondrial 2 1

Protein length

Min length 689
Max length 690
Mean length (sd) 689.1 (0.4)
Median length 689.0

Protein length distribution