Orthogroup:group_160


Homologs in group_160

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10 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13030 FBDBKF_13030 Morganella morganii S1 - RHS repeat domain-containing protein
FBDBKF_20435 FBDBKF_20435 Morganella morganii S1 - RHS repeat domain-containing protein
EHELCC_06345 EHELCC_06345 Morganella morganii S2 - RHS repeat domain-containing protein
EHELCC_19745 EHELCC_19745 Morganella morganii S2 - RHS repeat domain-containing protein
NLDBIP_06665 NLDBIP_06665 Morganella morganii S4 - RHS repeat domain-containing protein
NLDBIP_19760 NLDBIP_19760 Morganella morganii S4 - RHS repeat domain-containing protein
LHKJJB_03545 LHKJJB_03545 Morganella morganii S3 - RHS repeat domain-containing protein
LHKJJB_19725 LHKJJB_19725 Morganella morganii S3 - RHS repeat domain-containing protein
HKOGLL_07020 HKOGLL_07020 Morganella morganii S5 - RHS repeat domain-containing protein
HKOGLL_19640 HKOGLL_19640 Morganella morganii S5 - RHS repeat domain-containing protein

Distribution of group_160 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_160 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_160

Orthogroup content: 10 members

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This page summarizes the annotation of all members of the orthologous group group_160.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 10

Product

# Product Occurence
1 RHS repeat domain-containing protein 10

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3209 10 R General function prediction only (R) Uncharacterized conserved protein RhaS, contains 28 RHS repeats

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11021 10 insecticidal toxin complex protein TccC - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF18807 10 Tripartite Tc toxins repeat

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
Protein RhsA 1
Protein RhsD 1
Putative deoxyribonuclease RhsC 1
Putative uncharacterized protein YibJ 1
Toxin subunit YenC1 1
Toxin subunit YenC2 1
tRNA nuclease WapA 1
tRNA(Glu)-specific nuclease WapA 1
tRNA3(Ser)-specific nuclease WapA 1

Protein length

Min length 851
Max length 857
Mean length (sd) 854.0 (3.2)
Median length 854.0

Protein length distribution