Orthogroup:group_1559



Homologs in group_1559

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10100 FBDBKF_10100 Morganella morganii S1 ybeD DUF493 domain-containing protein
EHELCC_04900 EHELCC_04900 Morganella morganii S2 ybeD DUF493 domain-containing protein
NLDBIP_04900 NLDBIP_04900 Morganella morganii S4 ybeD DUF493 domain-containing protein
LHKJJB_13730 LHKJJB_13730 Morganella morganii S3 ybeD DUF493 domain-containing protein
HKOGLL_12805 HKOGLL_12805 Morganella morganii S5 ybeD DUF493 domain-containing protein
F4V73_RS00235 F4V73_RS00235 Morganella psychrotolerans ybeD DUF493 family protein YbeD
PMI_RS02080 PMI_RS02080 Proteus mirabilis HI4320 ybeD DUF493 family protein YbeD

Distribution of group_1559 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1559 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1559

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1559.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybeD 7

Product

# Product Occurence
1 DUF493 domain-containing protein 5
2 DUF493 family protein YbeD 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2921 7 T Signal transduction mechanisms (T) Putative lipoate-binding regulatory protein, UPF0250 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09158 7 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04359 7 Protein of unknown function (DUF493)

Annotations of the 131 SwissProt hits

Annotation Number of occurrences
UPF0250 protein Avin_08440 1
UPF0250 protein BB0170 1
UPF0250 protein BCc_307 1
UPF0250 protein BP0104 1
UPF0250 protein BPP0168 1
UPF0250 protein BU488 1
UPF0250 protein BUAP5A_481 1
UPF0250 protein BUAPTUC7_482 1
UPF0250 protein BUsg_472 1
UPF0250 protein Bphy_0213 1
UPF0250 protein Bphyt_0500 1
UPF0250 protein CGSHiEE_03170 1
UPF0250 protein CGSHiGG_02625 1
UPF0250 protein CKO_02527 1
UPF0250 protein COSY_0496 1
UPF0250 protein CV_3095 1
UPF0250 protein ECA1299 1
UPF0250 protein ESA_02696 1
UPF0250 protein ETA_23570 1
UPF0250 protein Ent638_1166 1
UPF0250 protein HCH_05838 1
UPF0250 protein HD_2015 1
UPF0250 protein HI_0028 1
UPF0250 protein IL0958 1
UPF0250 protein KPK_3910 1
UPF0250 protein KPN78578_06520 1
UPF0250 protein Lcho_4239 1
UPF0250 protein NE1487 1
UPF0250 protein NGK_1021 1
UPF0250 protein NGO0791 1
UPF0250 protein NMA1380 1
UPF0250 protein NMB1218 1
UPF0250 protein NMC1112 1
UPF0250 protein NT01EI_2946 1
UPF0250 protein NTHI0035 1
UPF0250 protein PA14_12110 1
UPF0250 protein PA3998 1
UPF0250 protein PC1_1177 1
UPF0250 protein PLES_09781 1
UPF0250 protein PM1928 1
UPF0250 protein PP_4802 1
UPF0250 protein PSEEN4821 1
UPF0250 protein PSHAa1021 1
UPF0250 protein PSPA7_1111 1
UPF0250 protein PSPTO_4820 1
UPF0250 protein Pmen_3793 1
UPF0250 protein PputGB1_4855 1
UPF0250 protein PputW619_0619 1
UPF0250 protein Pput_4677 1
UPF0250 protein Psyr_4360 1
UPF0250 protein RSc0326 1
UPF0250 protein Rmag_0541 1
UPF0250 protein SG0794 1
UPF0250 protein SO_1163 1
UPF0250 protein Sama_2593 1
UPF0250 protein Sbal195_3458 1
UPF0250 protein Sbal223_1087 1
UPF0250 protein Sbal_3280 1
UPF0250 protein Sfri_0694 1
UPF0250 protein Shal_3239 1
UPF0250 protein Shew185_3322 1
UPF0250 protein Shew_2940 1
UPF0250 protein Shewana3_0990 1
UPF0250 protein Shewmr4_0986 1
UPF0250 protein Shewmr7_1051 1
UPF0250 protein Spea_3154 1
UPF0250 protein Spro_1197 1
UPF0250 protein Sputcn32_2874 1
UPF0250 protein Sputw3181_1029 1
UPF0250 protein Ssed_3490 1
UPF0250 protein Swoo_3713 1
UPF0250 protein VC0395_A0469/VC395_0960 1
UPF0250 protein VCM66_0901 1
UPF0250 protein VC_0945 1
UPF0250 protein VIBHAR_01213 1
UPF0250 protein VP0718 1
UPF0250 protein VV0902 1
UPF0250 protein VV1_0282 1
UPF0250 protein YE3006 1
UPF0250 protein YPA_2499 1
UPF0250 protein YPDSF_2653 1
UPF0250 protein YPK_3025 1
UPF0250 protein YPN_1085 1
UPF0250 protein YPO2600/y1174/YP_1113 1
UPF0250 protein YPTB1093 1
UPF0250 protein YPTS_1150 1
UPF0250 protein YbeD 39
UPF0250 protein YpAngola_A1853 1
UPF0250 protein YpsIP31758_2953 1
UPF0250 protein bbp_432 1
UPF0250 protein mma_3250 1
UPF0250 protein plu1293 1
UPF0250 protein swp_3927 1

Protein length

Unique protein length 87

Protein length distribution