Orthogroup:group_1555


Homologs in group_1555

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10075 FBDBKF_10075 Morganella morganii S1 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
EHELCC_04875 EHELCC_04875 Morganella morganii S2 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
NLDBIP_04875 NLDBIP_04875 Morganella morganii S4 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
LHKJJB_13755 LHKJJB_13755 Morganella morganii S3 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
HKOGLL_12780 HKOGLL_12780 Morganella morganii S5 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
F4V73_RS00260 F4V73_RS00260 Morganella psychrotolerans rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
PMI_RS02105 PMI_RS02105 Proteus mirabilis HI4320 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH

Distribution of group_1555 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1555 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1555

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1555.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rlmH 7

Product

# Product Occurence
1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1576 7 J Translation, ribosomal structure and biogenesis (J) 23S rRNA pseudoU1915 N3-methylase RlmH

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00783 7 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02590 7 Predicted SPOUT methyltransferase

Annotations of the 516 SwissProt hits

Annotation Number of occurrences
Putative ribosomal RNA large subunit methyltransferase H 8
Ribosomal RNA large subunit methyltransferase H 507
Ribosomal RNA large subunit methyltransferase H 1 1

Protein length

Unique protein length 156

Protein length distribution