Orthogroup:group_1544


Homologs in group_1544

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10005 FBDBKF_10005 Morganella morganii S1 dsbD Thiol-disulfide interchange protein, contains DsbC and DsbD domains
EHELCC_04805 EHELCC_04805 Morganella morganii S2 dsbD Thiol-disulfide interchange protein, contains DsbC and DsbD domains
NLDBIP_04805 NLDBIP_04805 Morganella morganii S4 dsbD Thiol-disulfide interchange protein, contains DsbC and DsbD domains
LHKJJB_13825 LHKJJB_13825 Morganella morganii S3 dsbD Thiol-disulfide interchange protein, contains DsbC and DsbD domains
HKOGLL_12710 HKOGLL_12710 Morganella morganii S5 dsbD Thiol-disulfide interchange protein, contains DsbC and DsbD domains
F4V73_RS00330 F4V73_RS00330 Morganella psychrotolerans - protein-disulfide reductase DsbD family protein
PMI_RS02165 PMI_RS02165 Proteus mirabilis HI4320 - protein-disulfide reductase DsbD family protein

Distribution of group_1544 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1544 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1544

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1544.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dsbD 5
2 - 2

Product

# Product Occurence
1 Thiol-disulfide interchange protein, contains DsbC and DsbD domains 5
2 protein-disulfide reductase DsbD family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4232 7 O Posttranslational modification, protein turnover, chaperones (O) Thiol:disulfide interchange protein DsbD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K08344 7 suppressor for copper-sensitivity B - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02683 6 Cytochrome C biogenesis protein transmembrane region
PF11412 7 Thiol:disulfide interchange protein DsbD, N-terminal
PF13899 7 Thioredoxin-like

Annotations of the 52 SwissProt hits

Annotation Number of occurrences
Protein DipZ 3
Thiol:disulfide interchange protein DsbD 47
Thiol:disulfide interchange protein DsbD 1 1
Thiol:disulfide interchange protein DsbD 2 1

Protein length

Min length 676
Max length 678
Mean length (sd) 677.7 (0.8)
Median length 678.0

Protein length distribution