Orthogroup:group_1543


Homologs in group_1543

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10000 FBDBKF_10000 Morganella morganii S1 dsbC Protein thiol-disulfide isomerase DsbC
EHELCC_04800 EHELCC_04800 Morganella morganii S2 dsbC Protein thiol-disulfide isomerase DsbC
NLDBIP_04800 NLDBIP_04800 Morganella morganii S4 dsbC Protein thiol-disulfide isomerase DsbC
LHKJJB_13830 LHKJJB_13830 Morganella morganii S3 dsbC Protein thiol-disulfide isomerase DsbC
HKOGLL_12705 HKOGLL_12705 Morganella morganii S5 dsbC Protein thiol-disulfide isomerase DsbC
F4V73_RS00335 F4V73_RS00335 Morganella psychrotolerans - DsbA family protein
PMI_RS02170 PMI_RS02170 Proteus mirabilis HI4320 - DsbA family protein

Distribution of group_1543 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1543 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1543

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1543.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dsbC 5
2 - 2

Product

# Product Occurence
1 Protein thiol-disulfide isomerase DsbC 5
2 DsbA family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1651 7 O Posttranslational modification, protein turnover, chaperones (O) Protein thiol-disulfide isomerase DsbC

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01323 1 DSBA-like thioredoxin domain
PF13462 6 Thioredoxin
PF18312 7 Copper resistance protein ScsC N-terminal domain

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
Disulfide bond formation protein D 1
Na(+)/H(+) antiporter NhaA 2 2
Probable disulfide bond formation protein D 2
Thiol:disulfide interchange protein DsbA 4

Protein length

Min length 242
Max length 243
Mean length (sd) 242.1 (0.4)
Median length 242.0

Protein length distribution